Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq910 98.7 7e-16
>seq910
Length=30028
Score = 98.7 bits (108), Expect = 7e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || || || || || ||||| || ||||||||||| || ||
Sbjct 19696 ATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 19755
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || || ||||| || ||| | || || ||||||
Sbjct 19756 GACACCATCGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 19815
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||| | || ||||| || || || || ||||| | ||||| | |||||||||
Sbjct 19816 CAACGTCTCATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCTGATTACAAC 19875
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 19876 ATTCAGAAGGAGTCCAC 19892
Score = 96.9 bits (106), Expect = 2e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||| || || || || || || ||||| ||||| || ||
Sbjct 19924 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAGACTATTACGCTCGAGGTTGAATCTTCG 19983
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| | || | || | || ||||| ||||| | || || |||||
Sbjct 19984 GATACCATCGACAATGTGAAGTCGAAGA-TTCAGGACAAGGAAGGAATTCCCCCCGATCA 20042
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || || || ||||| || || || || | |||||| | ||||||||
Sbjct 20043 GCAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTTTCTGATTACAA 20102
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || || ||||||||| | |||
Sbjct 20103 CATCCAGAAGGAGTCCACACTCCAT 20127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338003074724672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |