Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq910 98.7 7e-16 >seq910 Length=30028 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || || || ||||| || ||||||||||| || || Sbjct 19696 ATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 19755 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || ||| | || || |||||| Sbjct 19756 GACACCATCGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 19815 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || || || || ||||| | ||||| | ||||||||| Sbjct 19816 CAACGTCTCATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCTGATTACAAC 19875 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 19876 ATTCAGAAGGAGTCCAC 19892 Score = 96.9 bits (106), Expect = 2e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || || || || || || ||||| ||||| || || Sbjct 19924 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAGACTATTACGCTCGAGGTTGAATCTTCG 19983 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || | || | || ||||| ||||| | || || ||||| Sbjct 19984 GATACCATCGACAATGTGAAGTCGAAGA-TTCAGGACAAGGAAGGAATTCCCCCCGATCA 20042 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || ||||| || || || || | |||||| | |||||||| Sbjct 20043 GCAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTTTCTGATTACAA 20102 Query 23790 CATACAAAAAGAGTCCACATTACAT 23814 ||| || || ||||||||| | ||| Sbjct 20103 CATCCAGAAGGAGTCCACACTCCAT 20127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338003074724672