Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq910 167 6e-36 seq972 125 2e-23 seq2 107 5e-18 >seq910 Length=30028 Score = 167 bits (184), Expect = 6e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||||||||| ||||| || || || | |||||||| | | || Sbjct 19917 ACGAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGT 19858 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| ||||| ||||| || |||||||| ||||| |||||||| Sbjct 19857 GCGGCCATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACC 19798 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| |||||| ||||||||||| || | ||| || || | Sbjct 19797 CTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTCAACTTCGAG 19738 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||||||| || | ||| || | ||| | ||||| Sbjct 19737 GGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 19696 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||| ||||| ||||| || || |||| |||||||| | | ||| Sbjct 20145 ACGAAGGCGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGT 20086 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| |||||||| || || || || || ||||| ||||| || Sbjct 20085 GCGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCC 20026 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| || ||||| ||||||| |||||||| || || | ||| || || | Sbjct 20025 TTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACCTCGAG 19966 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||| || |||||||| || Sbjct 19965 CGTAATAGTCTTGCCAGT 19948 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| |||||||| || || || |||| |||||| || | | || | ||||| Sbjct 19679 AGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCATCC 19620 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || | |||||||||||| || |||||||| |||||||| Sbjct 19619 TCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCC 19560 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || | || || || | || || ||| Sbjct 19559 TGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTC 19500 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 19499 TTGCCGGT 19492 >seq972 Length=25181 Score = 125 bits (138), Expect = 2e-23 Identities = 202/285 (71%), Gaps = 8/285 (3%) Strand=Plus/Minus Query 7436 TGGAAACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTA 7495 |||||| |||||||||||||||| ||||| || | ||||||| |||||| Sbjct 13085 TGGAAAT-TTATATTTAATATTTGCATTATTTTCAGGGTTATTAGGTACAGCTTTTTCTG 13027 Query 7496 TGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCA 7553 | | ||||| ||||||||| || || ||| ||| | || | || |||| || Sbjct 13026 TTTTAATAAGATTAGAATTAAGTGGACCTGGTGTACAATACATATCAGA--TAAT---CA 12972 Query 7554 ACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCC 7613 | | || || ||| ||||| || || || | | ||||| |||||| | |||||||| Sbjct 12971 ATTATATAATAGTATAATTACAGCTCACGCTATATTAATGATATTCTTTATGGTTATGCC 12912 Query 7614 GGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATAT 7673 | | ||||| || || ||||||| || | ||||||||||| || | ||||||||| Sbjct 12911 TGCATTAATAGGTGGATTTGGAAATTTCTTAATGCCTTTAATGATAGGAGGTCCTGATAT 12852 Query 7674 GGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718 ||| || || || | || ||||||||||| |||||| |||| || Sbjct 12851 GGCATTCCCTAGATTAAATAATATAAGTTTCTGATTATTACCTCC 12807 >seq2 Length=228398 Score = 107 bits (118), Expect = 5e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || || | ||||||||| | | || | ||||| || |||||||| || ||||| ||| Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 5530 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || |||||||| || || || ||||| || || ||||| ||||||| ||| Sbjct 5529 AGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTCG 5470 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||||| |||| || || || | ||||| ||||||||||| Sbjct 5469 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 5426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192506997579296