Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq910 167 6e-36
seq972 125 2e-23
seq2 107 5e-18
>seq910
Length=30028
Score = 167 bits (184), Expect = 6e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | |||||||||||||| ||||| || || || | |||||||| | | ||
Sbjct 19917 ACGAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGT 19858
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| |||||||| ||||| ||||| || |||||||| ||||| ||||||||
Sbjct 19857 GCGGCCATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGAATACC 19798
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| |||||| ||||||||||| || | ||| || || |
Sbjct 19797 CTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTCAACTTCGAG 19738
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||||||||| || | ||| || | ||| | |||||
Sbjct 19737 GGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 19696
Score = 145 bits (160), Expect = 2e-29
Identities = 151/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | |||||||| ||||| ||||| || || |||| |||||||| | | |||
Sbjct 20145 ACGAAGGCGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGT 20086
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| |||||||| || || || || || ||||| ||||| ||
Sbjct 20085 GCGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCC 20026
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||| || ||||| ||||||| |||||||| || || | ||| || || |
Sbjct 20025 TTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACCTCGAG 19966
Query 225672 CGTGATCGTCTTGCCCGT 225689
||| || |||||||| ||
Sbjct 19965 CGTAATAGTCTTGCCAGT 19948
Score = 132 bits (146), Expect = 1e-25
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| ||||| |||||||| || || || |||| |||||| || | | || | |||||
Sbjct 19679 AGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCATCC 19620
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||| || | |||||||||||| || |||||||| ||||||||
Sbjct 19619 TCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCC 19560
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| || | || || || | || || |||
Sbjct 19559 TGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTC 19500
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 19499 TTGCCGGT 19492
>seq972
Length=25181
Score = 125 bits (138), Expect = 2e-23
Identities = 202/285 (71%), Gaps = 8/285 (3%)
Strand=Plus/Minus
Query 7436 TGGAAACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTA 7495
|||||| |||||||||||||||| ||||| || | ||||||| ||||||
Sbjct 13085 TGGAAAT-TTATATTTAATATTTGCATTATTTTCAGGGTTATTAGGTACAGCTTTTTCTG 13027
Query 7496 TGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCA 7553
| | ||||| ||||||||| || || ||| ||| | || | || |||| ||
Sbjct 13026 TTTTAATAAGATTAGAATTAAGTGGACCTGGTGTACAATACATATCAGA--TAAT---CA 12972
Query 7554 ACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCC 7613
| | || || ||| ||||| || || || | | ||||| |||||| | ||||||||
Sbjct 12971 ATTATATAATAGTATAATTACAGCTCACGCTATATTAATGATATTCTTTATGGTTATGCC 12912
Query 7614 GGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATAT 7673
| | ||||| || || ||||||| || | ||||||||||| || | |||||||||
Sbjct 12911 TGCATTAATAGGTGGATTTGGAAATTTCTTAATGCCTTTAATGATAGGAGGTCCTGATAT 12852
Query 7674 GGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718
||| || || || | || ||||||||||| |||||| |||| ||
Sbjct 12851 GGCATTCCCTAGATTAAATAATATAAGTTTCTGATTATTACCTCC 12807
>seq2
Length=228398
Score = 107 bits (118), Expect = 5e-18
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| || | ||||||||| | | || | ||||| || |||||||| || ||||| |||
Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 5530
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || |||||||| || || || ||||| || || ||||| ||||||| |||
Sbjct 5529 AGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTCG 5470
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| ||||| |||| || || || | ||||| |||||||||||
Sbjct 5469 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 5426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192506997579296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |