Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq113 114 1e-20 >seq113 Length=223936 Score = 114 bits (126), Expect = 1e-20 Identities = 198/287 (69%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 29531 TGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC- 29589 || ||||| ||||||| || ||||||||||||| | |||| | |||| || | Sbjct 124781 TGTGGGTCATAGCCCTTCACCACAAAATCCTCTGCCTGCCATCCGTCAATGCTCCCCCCT 124840 Query 29590 --CCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTC 29647 | ||| | ||| ||||| || ||| | ||||| | || ||||| |||| Sbjct 124841 TTCTCCCTCGTAATCTCGAGTGTCGGGAAGTCGCGTGGCTCGCGTTCTAGCTGCGACCTC 124900 Query 29648 AGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCC 29707 || | || |||||||| || || ||||| || ||||||| | ||| |||| ||| Sbjct 124901 AGAGCATCGACGTGGTCTAGATATACGTGGGCGTCTCCCAAGACGTGCGTAAACGTTCCT 124960 Query 29708 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 29767 || | || || ||| || || ||||| | || | | | |||||| |||||||| Sbjct 124961 GGGACCAGGTCGCAGACATGCGCGATCATATGTGTTAATAAGGCGTAGCTAGCGATGTTG 125020 Query 29768 AAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 ||||| ||||| || |||||||| | || |||||||| |||||||| Sbjct 125021 AAGGGAACCCCAAGGCCCATGTCGCAAGATCTCTGGTACAGCTGGCA 125067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406155359019424