Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq910 187 5e-42
seq1408 150 4e-31
seq2 116 8e-21
seq808 87.8 4e-12
>seq910
Length=30028
Score = 187 bits (206), Expect = 5e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | ||| || || || |||||||| ||||
Sbjct 19923 ACCACCACGAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGA 19864
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||||||||| || || || || || |||||||| | ||||||||| || ||
Sbjct 19863 AAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGG 19804
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||| |||||||| | || ||| | ||||| |||||||| | ||| ||
Sbjct 19803 AATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATGGTGTCCGATGATTCAAC 19744
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||| || |||||||| || || | |||||| ||||| ||||||||
Sbjct 19743 TTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 19696
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || ||||| | || || || ||||| |||||||| |
Sbjct 19695 ACCACCACGGAGACGGAGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGA 19636
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || ||||| || ||||| |||||||||||| ||
Sbjct 19635 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGG 19576
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||| |||||||| | || || | ||||| ||||| || | |||||
Sbjct 19575 AATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGAC 19516
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATAT 283093
||||| || || ||||| || || | ||||| |||| |||
Sbjct 19515 CTCGAGGGTAATGGTCTTGCCGGTAAGGGTCTTGACGACTAT 19474
Score = 143 bits (158), Expect = 6e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| ||||| || || ||||| | ||| || || ||||||||||| |||| |
Sbjct 20150 CCACCACGAAGGCGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGAA 20091
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| |||||||| || || || || || || || | ||| || || || |||
Sbjct 20090 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 20031
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || |||||||| || ||||| | || || | ||||| || ||||||| ||| ||
Sbjct 20030 ATTCCTTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGATTCAACC 19971
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || || ||||| || || | ||||| || || ||||||||
Sbjct 19970 TCGAGCGTAATAGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19924
Score = 120 bits (132), Expect = 6e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || ||||| | || || || || || ||||||||||
Sbjct 19387 ACCACCACGAAGGCGGAGAACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAGTCAGA 19328
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || || || || |||| || || ||||| ||
Sbjct 19327 GAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGG 19268
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| | || ||| | |||||||| || || | |||||
Sbjct 19267 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTATCAGAGGACTCGAC 19208
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| | |||||| ||||| || ||
Sbjct 19207 CTCCAAAGTGATGGTCTTGCCGGT 19184
>seq1408
Length=106487
Score = 150 bits (166), Expect = 4e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || || || || || || || || | ||| || || |||||||||||||| |
Sbjct 91044 ACCGCCGCGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 91103
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || ||||| ||||||| || || |||||| ||
Sbjct 91104 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 91163
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || || | ||||| |||||||| | |||||
Sbjct 91164 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 91223
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||||| || || || |||||||| | ||||| ||||| || ||||| ||
Sbjct 91224 CTCGAGGGTAATGGTTTTACCCGTTAGGGTCTTGACGAAGATTTGCATGTT 91274
>seq2
Length=228398
Score = 116 bits (128), Expect = 8e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| || || ||||| |||| ||| |||||||||||||| || || || ||||| || ||
Sbjct 5589 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 5530
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| || ||||| || || |||||||| || || ||||| | || || | |||
Sbjct 5529 AGACGCTGCTGGTCGGGGGGGATTCCCTCCTTATCCTGAATCTTGGACTTCACATTGTCG 5470
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| |||||||| | ||||| || || ||||| ||||| ||||| | ||||| || ||
Sbjct 5469 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAA 5411
>seq808
Length=275957
Score = 87.8 bits (96), Expect = 4e-12
Identities = 149/215 (69%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250
|||||||| | || ||| | |||||| || |||||||||| || | ||||||
Sbjct 155066 AGGAGTTCCTCACTGAGGCTCTCCCTTGCGCCCTGCTCGGCATGAACGCGAACCTCATGA 155007
Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310
||| || || || ||||| || || | | | || || || || | ||||| | |
Sbjct 155006 AGCAGTACATTGAGTTCGTCGCCGACAGGCTACTTGTCGCTCTCGGCAATGAGAAGATCT 154947
Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370
| | |||| |||||||||| || |||||| ||| || ||| || || || ||||
Sbjct 154946 ACAGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACT 154887
Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404
||||||| |||||||| | || || || ||||||
Sbjct 154886 TCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCC 154852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046717956427936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |