Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12-
31] 1,584 sequences; 39,890,731 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1408 141 2e-28
seq910 141 2e-28
seq2 132 1e-25
>seq1408
Length=106487
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || ||||| || ||||||||||| || ||| |||
Sbjct 91268 CAAATCTTCGTCAAGACCCTAACGGGTAAAACCATTACCCTCGAGGTCGAGTCCTCGGAC 91209
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||||| |||||||| || || ||||| || ||||||||
Sbjct 91208 ACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 91149
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| || || | || || |||| || ||| ||
Sbjct 91148 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATC 91089
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 91088 CAGAAGGAGTCCACCCTCCACCTCGT 91063
>seq910
Length=30028
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| ||||| || || || ||||| |||||||| || ||| || |||
Sbjct 19699 CAGATCTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCGGAC 19758
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| |||||||| || || || ||||| || || |||
Sbjct 19759 ACCATCGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAACAA 19818
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| |||||||| | || ||| | ||||| ||| |
Sbjct 19819 CGTCTCATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCTGATTACAACATT 19878
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 19879 CAGAAGGAGTCCACCCTCCACCTTGT 19904
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || || || || || || || || |||||||| ||| || ||
Sbjct 19927 CAGATCTTTGTCAAGACCCTTACTGGCAAGACTATTACGCTCGAGGTTGAATCTTCGGAT 19986
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || |||||||||||||| |||||||| || || || |||||
Sbjct 19987 ACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGAATTCCCCCCGATCAGCAG 20046
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || ||||| || ||||| | |||||| | ||||| ||| ||
Sbjct 20047 CGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTTTCTGATTACAACATC 20106
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || ||||| ||||||||
Sbjct 20107 CAGAAGGAGTCCACACTCCATCTTGT 20132
Score = 131 bits (144), Expect = 4e-25
Identities = 149/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || || || || || || || ||||||||||| || || ||||||||||
Sbjct 19478 TCGTCAAGACCCTTACCGGCAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACCATCG 19537
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| || ||||| ||||| |||||||| || || || ||||| ||||| |||||| | |
Sbjct 19538 ACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGA 19597
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
| |||||||| || |||||||| ||||| | || || | || || || |||| || |
Sbjct 19598 TTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAATATCCAGAAGG 19657
Query 178111 AATCAACACTGCATCTTGTT 178130
| || || || |||||||||
Sbjct 19658 AGTCTACTCTCCATCTTGTT 19677
Score = 105 bits (116), Expect = 2e-17
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || ||||| | ||||| || ||| || || ||||| ||||||||
Sbjct 19184 ACCGGCAAGACCATCACTTTGGAGGTCGAGTCCTCTGATACTATCGACAACGTCAAGTCG 19243
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|||||||||||||| || || ||||| || |||||||| || || || ||||| |||||
Sbjct 19244 AAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATTTTCGCTGGAAAG 19303
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| || || || | || || | || || || | || || || || || || |||
Sbjct 19304 CAGCTTGAGGACGGCCGCACCCTCTCTGACTACAATATTCAGAAGGAGTCTACTCTCCAT 19363
Query 178125 CTTGTT 178130
||||||
Sbjct 19364 CTTGTT 19369
>seq2
Length=228398
Score = 132 bits (146), Expect = 1e-25
Identities = 132/171 (77%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||| || || || ||||| || || || |||||||| ||||| || ||| ||||| ||
Sbjct 5410 TTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 5469
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
||| || || || ||||||||||| || || |||||||| || |||||||| || ||
Sbjct 5470 CGACAATGTGAAGTCCAAGATTCAGGATAAGGAGGGAATCCCCCCCGACCAGCAGCGTCT 5529
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099
||| ||||||||||| |||||||| ||||| | || ||| | ||||| ||
Sbjct 5530 TATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAA 5580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203706770275296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |