Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20aurantiacum_20[genbank_20GCA_5F000812075.1_202014-12- 31] 1,584 sequences; 39,890,731 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1408 141 2e-28 seq910 141 2e-28 seq2 132 1e-25 >seq1408 Length=106487 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || ||||| || ||||||||||| || ||| ||| Sbjct 91268 CAAATCTTCGTCAAGACCCTAACGGGTAAAACCATTACCCTCGAGGTCGAGTCCTCGGAC 91209 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 91208 ACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 91149 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || |||| || ||| || Sbjct 91148 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATC 91089 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 91088 CAGAAGGAGTCCACCCTCCACCTCGT 91063 >seq910 Length=30028 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| ||||| || || || ||||| |||||||| || ||| || ||| Sbjct 19699 CAGATCTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCGGAC 19758 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| || || || ||||| || || ||| Sbjct 19759 ACCATCGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAACAA 19818 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| |||||||| | || ||| | ||||| ||| | Sbjct 19819 CGTCTCATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCTGATTACAACATT 19878 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 19879 CAGAAGGAGTCCACCCTCCACCTTGT 19904 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || || || |||||||| ||| || || Sbjct 19927 CAGATCTTTGTCAAGACCCTTACTGGCAAGACTATTACGCTCGAGGTTGAATCTTCGGAT 19986 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||||||||| |||||||| || || || ||||| Sbjct 19987 ACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGAATTCCCCCCGATCAGCAG 20046 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||||| || ||||| | |||||| | ||||| ||| || Sbjct 20047 CGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTTTCTGATTACAACATC 20106 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| |||||||| Sbjct 20107 CAGAAGGAGTCCACACTCCATCTTGT 20132 Score = 131 bits (144), Expect = 4e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || || || || || ||||||||||| || || |||||||||| Sbjct 19478 TCGTCAAGACCCTTACCGGCAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACCATCG 19537 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || ||||| ||||| |||||||| || || || ||||| ||||| |||||| | | Sbjct 19538 ACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGA 19597 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | |||||||| || |||||||| ||||| | || || | || || || |||| || | Sbjct 19598 TTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAATATCCAGAAGG 19657 Query 178111 AATCAACACTGCATCTTGTT 178130 | || || || ||||||||| Sbjct 19658 AGTCTACTCTCCATCTTGTT 19677 Score = 105 bits (116), Expect = 2e-17 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || ||||| | ||||| || ||| || || ||||| |||||||| Sbjct 19184 ACCGGCAAGACCATCACTTTGGAGGTCGAGTCCTCTGATACTATCGACAACGTCAAGTCG 19243 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| || || ||||| || |||||||| || || || ||||| ||||| Sbjct 19244 AAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATTTTCGCTGGAAAG 19303 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| || || || | || || | || || || | || || || || || || ||| Sbjct 19304 CAGCTTGAGGACGGCCGCACCCTCTCTGACTACAATATTCAGAAGGAGTCTACTCTCCAT 19363 Query 178125 CTTGTT 178130 |||||| Sbjct 19364 CTTGTT 19369 >seq2 Length=228398 Score = 132 bits (146), Expect = 1e-25 Identities = 132/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||| || || || ||||| || || || |||||||| ||||| || ||| ||||| || Sbjct 5410 TTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 5469 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || || || ||||||||||| || || |||||||| || |||||||| || || Sbjct 5470 CGACAATGTGAAGTCCAAGATTCAGGATAAGGAGGGAATCCCCCCCGACCAGCAGCGTCT 5529 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 ||| ||||||||||| |||||||| ||||| | || ||| | ||||| || Sbjct 5530 TATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAA 5580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203706770275296