Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq121 105 7e-18 >seq121 Length=116706 Score = 105 bits (116), Expect = 7e-18 Identities = 196/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || || ||||| || ||| | |||||||| ||||||||||| || || Sbjct 114913 ATGTAGGTGTCAATGAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATTTGG 114854 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | || || || || || |||||| || | || Sbjct 114853 AAACCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGGCGCTGAATCGCTCAACGAGG 114794 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| ||||| |||||| |||||||| || || | || ||| | |||||| Sbjct 114793 TTCTCGTTGACGATACCGTCGGAGGCGGCGAAGAAGGCAAGAATGTGCGAGACGAAATAC 114734 Query 17414 TTTTCGTCCGGTGTAAG---AACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 || ||||| | || | |||||| | | ||| ||||| | ||| | || Sbjct 114733 TTCTCGTCATCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCGATCTCC 114674 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 |||| |||||| ||| ||| | ||||| || ||||| | |||||| Sbjct 114673 TCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAAAT 114627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517541802509160