Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq121 87.8 2e-12 >seq121 Length=116706 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || || ||||| || | | ||| | || ||||| |||||||| || || || Sbjct 114913 ATGTAGGTGTCAATGAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATTTGG 114854 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || || |||||||| || ||||| | || || || || || ||||| || | ||| Sbjct 114853 AAACCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGGCGCTGAATCGCTCAACGAGG 114794 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 ||||| || ||||||||||| || || || || || | |||||| | |||||| Sbjct 114793 TTCTCGTTGACGATACCGTCGGAGGCGGCGAAGAAGGCAAGAATGTGCGAGACGAAATAC 114734 Query 16652 TTTTCGTCAGATGTAAG---AATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708 || |||||| | || | | ||| || | | ||| ||||| | ||| | || Sbjct 114733 TTCTCGTCATCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCGATCTCC 114674 Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 || | ||||| || ||| | ||||| || ||||||| |||||| Sbjct 114673 TCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAAAT 114627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511410647496840