Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq25 179 4e-40 seq121 86.0 7e-12 >seq25 Length=276129 Score = 179 bits (198), Expect = 4e-40 Identities = 573/882 (65%), Gaps = 24/882 (3%) Strand=Plus/Minus Query 53701 CAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 53760 ||| |||| ||||||| || ||||| || || |||| | | ||| || | || || Sbjct 148314 CAAGGCAAGCGATGCCAAGTTGCAAACCGCCACTTCATCCGGAGCCGAGTACTCGATGAT 148255 Query 53761 CTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 53817 ||| ||||| ||||| |||| ||| || || | || | ||| || ||||| Sbjct 148254 CTCGGTGCAGAGATTGGAGCTACG---GATAGTGCCAAGGTTCTTTTGGTTGCTCTTGCG 148198 Query 53818 GTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAAT 53877 ||| || ||||| ||||| ||||| || | || ||||| |||| | || | || Sbjct 148197 GTTGCAGTGGTCCTTGTAAAGCATGAAAGGATTTCCTGTTTCGGTCTGAGCCTCCAAGAT 148138 Query 53878 CGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGT-ATCTCTT--TTCTCTTTCGTA 53934 || | ||||| ||||||| | || ||| | | | ||| | ||||| Sbjct 148137 GGCGTACCAGAGCTTTTGAGCCTTGAG---AGTCTTGCGACCGCGGCCTTCCTTCTCGTA 148081 Query 53935 TAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 53994 | |||||| || ||||| || || | || | | | || || ||||| | Sbjct 148080 CTTTTCATACAAAGCCTCGAACTCCTCACCATAGCAATCGGCAAGGCCGGGGCATTCGTT 148021 Query 53995 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 54054 || ||||||| | ||| || |||| | | ||||| ||||| || ||||| ||||| Sbjct 148020 GGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCAACTCGCTTCATGAAAAGATCGGGAAT 147961 Query 54055 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 54114 ||| || || | || ||||| | | || | || || || || ||||| ||| Sbjct 147960 CCAGAGTGCGAGGAAGAGATCACGAGCTCGAATCTCTTCCTTACCGTGGTTCTTGCGAAG 147901 Query 54115 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGG 54174 || | |||| | | | ||| | ||||| || || | ||| |||| | |||| || Sbjct 147900 GTCCAAGAACTCGAATACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCGG 147841 Query 54175 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 54234 || || || || || || || | ||| || |||||||| || | || | | ||| || Sbjct 147840 GCGCTTATTACCGCCTTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGGG 147781 Query 54235 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATT 54294 |||||| || ||||||| ||||| ||||||| ||||| || |||| ||||| Sbjct 147780 AATAATGCCGTTGGATGTTCCATTTGTCCCGGCAATATATGAGCCTGTGGCGCGAATGCG 147721 Query 54295 ACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 54354 | || || || || || || |||||||| ||||| | |||||| || || || Sbjct 147720 ATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCAAGTCTTCAATGT 147661 Query 54355 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 54414 || || || ||||| ||||| |||||| |||||| | || || || ||| | || Sbjct 147660 GTCGTAAATTCCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAAGATAACTG 147601 Query 54415 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 54474 | | || || || || || | ||||| ||||| || || || |||| || Sbjct 147600 GGCTTGGGGCGTGCCGGCGTTGAAGAGAGTAGGTGAAGCATGAGTGAAGAATTTGGACGA 147541 Query 54475 AAGTAGATTGTACGTCTCGAT----AGCTGA--GTCTATATCCCATTGATGAATTCCTAC 54528 | ||||||||||||||| || ||| | ||| || ||| ||| || || Sbjct 147540 CATTAGATTGTACGTCTCAATCACCCGCTCAACGTC-ATCGCCC-----CAAATACCGAC 147487 Query 54529 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 54570 ||||||||||| | |||||||||||||| || || ||||| Sbjct 147486 AGCGACACGCATAATCATGTGCTGAGGTCGCTCGACAATCTT 147445 >seq121 Length=116706 Score = 86.0 bits (94), Expect = 7e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || ||||| ||| ||| ||||||||||| | || | || ||||| || || || Sbjct 115258 CACGCGAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTAAGA 115199 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| ||||||||||| || ||||| || ||||| ||||| | || ||||| Sbjct 115198 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAG 115139 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAA 24279 || || || || || || ||||||| Sbjct 115138 ATACCCTCGACGGCAGCGAAGGCAA 115114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593717243567760