Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq121 205 1e-47 seq38 150 2e-31 seq5 125 7e-24 >seq121 Length=116706 Score = 205 bits (226), Expect = 1e-47 Identities = 319/451 (71%), Gaps = 4/451 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| || |||||||| || | | | |||||| |||||| |||| | Sbjct 115051 AGAAGGCCGACTGGGCTCTCCGCTGGATTGCTGACCGCGAGGCCACCTTCGCTCAGCGTC 115110 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || |||||||| ||||||||||| ||||||| || || ||| |||| || | Sbjct 115111 TCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATTTTCT 115170 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || |||||||||||||| || || ||| ||| |||||||||||| | | Sbjct 115171 GGCTCAAGAAGCGTGGCCTCATGCCCGGTCTTACCTTCTCCAATGAGCTCATCTCCCGTG 115230 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||||||||| || |||||| || || | |||||| || | ||| || || Sbjct 115231 ACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTTCTCCCACCTCAAGCACCGCCCCG 115290 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 | | || | ||| ||| ||| | || || ||| ||||||||| ||||||| Sbjct 115291 ACAAGCAGCTCATCAAGGACATCATTGTTGATGCCGTCAAGATCGAGCAGGAGTTCCTCA 115350 Query 117282 CCGAAGCGCT-GCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 | || || || || |||| || || || | || ||||| | ||| ||| ||||| Sbjct 115351 CTGAGGCCCTCCCCTGTGC-CCTTCTCGGCATGAA-CGCGAACCTCATGAAGCAGTACAT 115408 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 || |||||||||||||||||||| ||| || | || ||| ||||| | | Sbjct 115409 TGAATTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGAAACGAGAAGATCTACAGGTCCGC 115468 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTCC 117430 |||||| | ||||| ||| | ||||||| Sbjct 115469 CAACCCCTTCGACTTCATGGAGAACATCTCC 115499 Score = 172 bits (190), Expect = 6e-38 Identities = 214/287 (75%), Gaps = 7/287 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| ||||||| | || || Sbjct 114627 ATTTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTC 114686 Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | | | || || ||||| ||||| || Sbjct 114687 TCCAAGGATCTCCA-CGACTGGAACAACAAGCTCAATGATGACGAGAAGTATTTCGTCTC 114745 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 |||| | || ||||| ||||||||| |||||| |||||||||||||| || || ||||| Sbjct 114746 GCACATTCTTGCCTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTCGTTGAGCG 114805 Query 116812 TTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 ||| || | ||||| ||| | ||||||| || ||||||||||| || || ||| | Sbjct 114806 ATTCAGCGC-CGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGA 114864 Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||||| | ||||| || | || || |||||| ||||| ||| Sbjct 114865 TGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACCTAC 114911 >seq38 Length=234780 Score = 150 bits (166), Expect = 2e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| |||||||| ||||| || || || |||||||| ||||||||| | || ||||| | Sbjct 18686 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 18627 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | | |||| | | | ||||| || || | ||||| |||||||||||| | || Sbjct 18626 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 18567 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| || || || |||| ||| ||||| ||||| || |||| ||||||||| ||||| Sbjct 18566 CCAACAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTA 18507 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| |||| || || || || Sbjct 18506 CAACATCCAGAAGGAGTCCACCCTCCACCTCGT 18474 >seq5 Length=463292 Score = 125 bits (138), Expect = 7e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || ||||| ||||||||| |||| ||||| | |||||| | | Sbjct 253822 TCGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCG 253763 Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819 | | | ||| || || | ||||| ||||| || || | ||||| |||||| | | Sbjct 253762 ACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGA 253703 Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 | | ||| ||||| ||||| || || | ||||||||| ||||||||| |||||||||| Sbjct 253702 TTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGG 253643 Query 40880 AGGCCACGCTGCATCTAGT 40898 || ||||||| ||||| || Sbjct 253642 AGTCCACGCTCCATCTGGT 253624 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||| || |||| ||||| | || Sbjct 253376 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACCATTACGCTCGAAGTCGAGTCTTCC 253317 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | ||| || |||| ||||| ||||| |||||| | || ||| Sbjct 253316 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGATCAG 253257 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| ||||| ||||| || |||| ||||| || || ||||| Sbjct 253256 CAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAAT 253197 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | ||||| ||||| || Sbjct 253196 ATCCAGAAGGAGTCTACGCTCCATCTCGT 253168 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || || ||| |||| || ||| | | Sbjct 253604 ATGCAGATTTTCGTGAAGACTCTTACCGGCAAGACGATTACCCTCGAAGTTGAATCATCG 253545 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| || || ||||||||||| | ||||| Sbjct 253544 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGACCA 253486 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| || || || || ||||| || | |||||||| || ||||| Sbjct 253485 ACAACGTCTTATCTTTGCTGGTAAGCAACTGGAAGATGGCCGCACCCTTTCTGATTACAA 253426 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| |||| || || || || Sbjct 253425 CATTCAGAAGGAGTCCACCCTTCACCTCGT 253396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515215419579120