Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19]
587 sequences; 43,301,991 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq5 116 4e-21
seq38 114 1e-20
seq287 87.8 2e-12
>seq5
Length=463292
Score = 116 bits (128), Expect = 4e-21
Identities = 143/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || ||||||||||||| ||||| || |||| || |||||||| || |||||
Sbjct 253185 CTCCTTCTGGATATTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 253244
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
||||| |||||||| |||| || | | |||||||||| ||| | || | || |
Sbjct 253245 AATGAGACGCTGCTGATCGGGGGGGATTCCCTCCTTGTCC-TGAATCTTCGACTTCACAT 253303
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | || ||| || || || |||| ||| ||||| ||||| || || ||||| |
Sbjct 253304 TGTCGATGGTATCGGAAGACTCGACTTCGAGCGTAATGGTCTTGCCGGTAAGGGTCTTGA 253363
Query 43171 CAAAGATTTGCAT 43183
||||||| |||||
Sbjct 253364 CAAAGATCTGCAT 253376
Score = 95.1 bits (104), Expect = 1e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| |||||||||||||||| || || || |||| || |||||||| ||||||||
Sbjct 253952 TCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAA 254011
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099
|| || |||||||| |||| || | || |||||||||| ||| ||
Sbjct 254012 ATCAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 254058
Score = 93.3 bits (102), Expect = 5e-14
Identities = 140/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| |||||||||| || || || | || || || ||||||||||| ||
Sbjct 253413 CTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTGCTTACCAGCAAA 253472
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| || || || ||||||| || | || |||||| ||| ||| | || | |||| ||
Sbjct 253473 GATAAGACGTTGTTGGTCGGGAGGGATGCCCTCCTTATCC-TGAATCTTGGACTTGA-CG 253530
Query 43111 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169
| | | | ||||| ||||| || |||| || || || ||||| || || |||||
Sbjct 253531 TTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCGGTAAGAGTCTTC 253590
Query 43170 ACAAAGATTTGCAT 43183
|| || || |||||
Sbjct 253591 ACGAAAATCTGCAT 253604
>seq38
Length=234780
Score = 114 bits (126), Expect = 1e-20
Identities = 143/196 (73%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || | || || || |||| || |||||||| || |||||
Sbjct 18491 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 18550
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||| ||||||| || | || |||||||||| ||| || |||| |
Sbjct 18551 GATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 18610
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||| || || || || | |||||||| ||||||||||| ||||| ||
Sbjct 18611 GTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 18670
Query 43172 AAAGATTTGCATTTTT 43187
||||||||||| |||
Sbjct 18671 GAAGATTTGCATGTTT 18686
>seq287
Length=44202
Score = 87.8 bits (96), Expect = 2e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| |||||||||||||||| || || || | || || |||||||| || ||||| |
Sbjct 23319 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 23378
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTC 43112
| || ||||| || |||| || | | |||||||||| ||| | || | || | |
Sbjct 23379 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCC-TGAATCTTGGACTTCACATTG 23437
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | |||||| || || || || | |||||||| || ||||| || ||||| |||
Sbjct 23438 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACA 23497
Query 43173 AA 43174
||
Sbjct 23498 AA 23499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571813404288360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |