Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq38 118 8e-22 seq5 102 6e-17 seq287 84.2 2e-11 >seq38 Length=234780 Score = 118 bits (130), Expect = 8e-22 Identities = 154/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| ||||||||||| || ||| |||| || || || Sbjct 18479 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTG 18538 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| |||||||||||||| || | |||||||||||| || || Sbjct 18539 CTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 18598 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| ||| ||||| | ||| || ||||||||||| Sbjct 18599 GGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 18658 Query 45313 CAGAGTCTTCACAAAGATTTGCATG-TTGCCT 45343 || ||||| || |||||||||||| |||||| Sbjct 18659 TAGGGTCTTGACGAAGATTTGCATGTTTGCCT 18690 >seq5 Length=463292 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| |||||||||||||||||| || || ||| | || |||||||| Sbjct 253401 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTG 253460 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || || | || |||||||||||||| | |||||||| ||| ||| || Sbjct 253461 CTTACCAGCAAAGATAAGACGTTGTTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTT 253520 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | ||||| || || || | ||||||||||||||| || Sbjct 253521 GGACTTGACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCGGT 253580 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 ||||||||||| || || ||||| Sbjct 253581 AAGAGTCTTCACGAAAATCTGCAT 253604 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || |||||| ||||||||| || ||||||||| || ||| | || || Sbjct 253624 ACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCG 253683 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| ||||| || |||||||| ||||| | ||||||||||||| Sbjct 253684 AGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGG 253743 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | | |||| ||| ||||| | ||| || |||||| Sbjct 253744 ATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTG 253803 Query 45308 CCCGTCAGAGTCTTCAC 45324 || || || ||||| || Sbjct 253804 CCGGTAAGGGTCTTGAC 253820 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| || ||||| || || ||| |||| || || || Sbjct 253174 TGGAGCGTAGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTGC 253233 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | ||||| || ||||| || | |||||||||||| ||| || Sbjct 253234 TTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGGATTCCCTCCTTGTCCTGAATCTTC 253293 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | | || | ||| || || | ||||| |||||||| || Sbjct 253294 GACTTCACATTGTCGATGGTATCGGAAGACTCGACTTCGAGCGTAATGGTCTTGCCGGTA 253353 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| Sbjct 253354 AGGGTCTTGACAAAGATCTGCAT 253376 >seq287 Length=44202 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 |||||||||| ||||| || || ||| | || || || || ||||||||||| | Sbjct 23319 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 23378 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 | | |||||||| |||||||| | |||||||||||| ||| || ||| || Sbjct 23379 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 23438 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | ||||| ||| ||||| | ||| || ||||| ||||| || ||||| |||| Sbjct 23439 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAA 23498 Query 45327 A 45327 | Sbjct 23499 A 23499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395072373607327