Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq25 383 1e-101 seq121 138 1e-27 seq38 102 7e-17 >seq25 Length=276129 Score = 383 bits (424), Expect = 1e-101 Identities = 1079/1651 (65%), Gaps = 34/1651 (2%) Strand=Plus/Minus Query 22247 GACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATC 22306 ||||| ||||||||| || || ||||||||||| ||||| | | || |||||| Sbjct 149084 GACTGCGACTGATCGATGAAGGCACCTCGATCGGCAGCCATCTGGACCACGGTACGCTGG 149025 Query 22307 GACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTC 22366 || |||||||||||||||||||| || | |||| || || || | ||| | Sbjct 149024 GAGATTTCCCATACGGTCTTGTAGAGGGCCTTGATATCCTCGGGAATGCTTGGGATATTT 148965 Query 22367 TGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATG 22426 || | || || | | ||||| |||||| |||| || ||| | || | Sbjct 148964 TGAATAGAGCCACCTTCGGCGATGATGCGATTTTTCATCGAGTCCGACCAAAGGCCAA-- 148907 Query 22427 GCGGTCAA----ATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGAC 22482 |||||| ||| || || |||| || || || |||||||| | |||||| Sbjct 148906 --GGTCAACAAGATCCCGGAGAAGCCAGGGGTTGACGACCTGGAACTCGCCCGCCAAGAC 148849 Query 22483 GCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTG 22542 ||| |||||||||||||| |||||| | ||||| || |||| ||||| || || || || Sbjct 148848 GCGTCGTTGGTAAATGTTCGATGTGTATGGTTCAAAGCATTCGTTGTTCCCGAGAATTTG 148789 Query 22543 AGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TT 22600 || || || || ||||| || ||||||| || ||| | | ||| |||| || Sbjct 148788 AGATGTGCTTGCAGTGGGCATGGGGGCCAACAAAAGGCTGTTACGGACGCCATGCTGCTT 148729 Query 22601 GAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCAC 22660 || | | || ||||||| ||||| |||||| || || ||| | ||||| |||| Sbjct 148728 GATCTGCTCCTTCAGAGCATC--CCAGTTCCACAGGTCCGAGGGCTTGACATT---CCAC 148674 Query 22661 ATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCA 22720 || ||||| || | | || || | || |||||||||||| || || || Sbjct 148673 ATGTCGTACTGGAGAATTCCTTGAGAGACGGGAGAGCCTTCGTACGTCGAATAGGGGCCC 148614 Query 22721 TATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATT 22780 | | ||| | || ||| |||| ||| ||| || || ||||| |||||| Sbjct 148613 TGCTCCTTGGCGATCTCCATTGACGCTTCCAGAGCGGCGTGGTAGATTGTCTCAAAGATT 148554 Query 22781 TTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCG 22840 | | || | | ||| || | |||| | ||||| |||| | ||| || Sbjct 148553 TGAGTATTGAGCTGCCTGGCCTCGGGGGATTCGAAGGGCATGCGCAGGGCAAGGAAGGCA 148494 Query 22841 TCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGC- 22899 ||||||| || || ||||| | ||| || || |||| || ||| || |||| Sbjct 148493 TCCGCCAATCCTTGCACGCCCACACCAATGGGCCGGTGGCGCATATTG----CTGTTGCG 148438 Query 22900 ---CTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAAT 22956 ||| | | || || | || ||| || | | || | |||| || | Sbjct 148437 GGCCTCCTGTACCGGGTAGTAGTTGACATCAATGATCTTATTGAGATTTCGAACGACGAC 148378 Query 22957 TTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGA-TTGTA--CAACAAACTT 23013 || || | ||||||||||| ||||| ||||| | || ||| Sbjct 148377 CTTGGTCACTTCGTGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTAGTCGACGAACGA 148318 Query 23014 GTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTAC 23073 | | ||| | ||| || | ||||| || ||||| || || | || |||||| | Sbjct 148317 GGGCAAGGCAAGCGATGCCAAGTTGCAAACCGCCACTTCATCCGGAGCCGAGTACTCGAT 148258 Query 23074 AATTTCGGTACATAGATTG---CTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTT 23130 || ||||| || |||||| |||| || ||||| | || | |||||||| || Sbjct 148257 GATCTCGGTGCAGAGATTGGAGCTACGG---ATAGTGCCAAGGTTCTTTTGGTTGCTCTT 148201 Query 23131 TCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGAT 23190 || ||||| |||||||| |||||| | || | || || ||| ||| | ||| | Sbjct 148200 GCGGTTGCAGTGGTCCTTGTAAAGCATGAAAGGATTTCCTGTTTCGGTCTGAGCCTCCAA 148141 Query 23191 GATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGT 23249 ||| || ||| | | ||||| | | | ||| || | | |||||| | ||||| Sbjct 148140 GATGGCGTACCAGAGCTTTTGAGCCTTGAGA-GTCTTGCGACCGCGGCCTTCCTTCTCGT 148082 Query 23250 ACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCA 23309 |||||| ||||| || || || || |||| || || ||||| |||||||| ||| Sbjct 148081 ACTTTTCATACAAAGCCTCGAACTCCTCACCATAGCAATCGGCAAGGCCGGGGCATTCGT 148022 Query 23310 TCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTA 23369 | || ||||| || |||| || |||||||| || |||| |||||||| || | Sbjct 148021 TGGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCAACTCGCTTCATGAAAAGATCGGGAA 147962 Query 23370 TCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCA 23429 |||| || ||| ||| || || || || || | ||| || || ||| |||||| | Sbjct 147961 TCCAGAGTGCGAGGAAGAGATCACGAGCTCGAATCTCTTCCTTACCGTGGTTCTTGCGAA 147902 Query 23430 AATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCG 23489 ||||| || || || || ||||| ||||| ||||| ||||| | |||||| || |||| Sbjct 147901 GGTCCAAGAACTCGAATACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCG 147842 Query 23490 GTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCG 23549 | | |||||| ||||| || || ||||| | ||| ||||||||| | || | ||||| | Sbjct 147841 GGCGCTTATTACCGCCTTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGG 147782 Query 23550 GCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGT 23609 | | | |||||||| | || | || || | | || ||| | || |||| | Sbjct 147781 GAATAATGCCGTTGGATGTTCCATTTGTCCCGGCAATATATGAGCCTGTGGCGCGAATGC 147722 Query 23610 TGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAG 23669 || | || || || ||||| ||| || ||| || ||||| ||||| |||| | Sbjct 147721 GATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCAAGTCTTCAATG 147662 Query 23670 TGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTT 23729 ||||||| || ||||| || ||||| || || | |||| | ||| |||||||| | | Sbjct 147661 TGTCGTAAATTCCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAAGATAACT 147602 Query 23730 GCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCG 23789 | |||| |||||| |||| ||| || || || || || || ||| || || Sbjct 147601 GGGCTTGGGGCGTGCCGGCGTTGAAGAGAGTAGGTGAAGCATGAGTGAAGAATTTGGACG 147542 Query 23790 ACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGA 23849 |||||||||||||||| || || | |||| ||| || || ||||||| |||| Sbjct 147541 ACATTAGATTGTACGTCTCAATCACCCGCTCAACGTCATCGCCCCAAATACCGACAGCGA 147482 Query 23850 CGCGCATCATCATGTATTGAGGTCTCTCGAC 23880 | ||||| ||||||| ||||||| |||||| Sbjct 147481 CACGCATAATCATGTGCTGAGGTCGCTCGAC 147451 >seq121 Length=116706 Score = 138 bits (152), Expect = 1e-27 Identities = 320/478 (67%), Gaps = 12/478 (3%) Strand=Plus/Plus Query 57956 GGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGG 58015 |||||| ||||| || | || | || ||||| |||||||| ||||| ||||| || Sbjct 115091 GGCCACCTTCGCTCAGCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGG 115150 Query 58016 CAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAG 58075 |||||| | || || ||| | ||||| || ||||| |||||||| || || || Sbjct 115151 TGCCTTTGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTTACCTTCTC 115210 Query 58076 CAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTC 58135 ||| ||| | || || || |||||||||||||| || || || |||||||| ||| ||| Sbjct 115211 CAATGAGCTCATCTCCCGTGACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTTCTC 115270 Query 58136 TCACATTGTCAATAAACCGACGCG----GGATCGCATCTTGGACATTATCACCGAGGCGG 58191 ||| |||| |||| | || | | | |||| |||||| || || || | Sbjct 115271 CCAC---CTCAA-GCACCGCCCCGACAAGCAGCTCATCAAGGACATCATTGTTGATGCCG 115326 Query 58192 TCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACA 58251 || |||||| | ||||| |||| || ||||| || ||| | ||||| |||||| Sbjct 115327 TCAAGATCGAGCAGGAGTTCCTCACTGAGGCCCTCCCCTGTGCCCTTCTCGGCATGAACG 115386 Query 58252 ATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GAT 58309 | | ||| |||||||||| || || |||||||| || | ||| || || Sbjct 115387 CGAACCTCATGAAGCAGTACATTGAATTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGAA 115446 Query 58310 TGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGA 58369 |||| || |||| | || || || || || ||| | ||||| |||| Sbjct 115447 ACGAGAAGATC--TACAGGTCCGCCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGG 115504 Query 58370 GGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 |||||||| ||||| ||||| || ||| | || || || || |||||| ||| Sbjct 115505 TGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCCGGCGTCATG 115562 >seq38 Length=234780 Score = 102 bits (112), Expect = 7e-17 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||||||||||||| ||||| ||||| || || ||||| || |||||| | || || || Sbjct 18687 CAAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGT 18628 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | || |||| |||| | ||||| | || ||||||||| ||| | || |||| Sbjct 18627 CCTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCG 18568 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||| |||||||| || ||||| ||||| ||| | || ||| Sbjct 18567 ACCAACAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGAC 18527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763129189040