Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq121 122 2e-22 seq25 86.0 1e-11 >seq121 Length=116706 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| ||||| || || || |||||||| || ||||| || || |||||||||||| Sbjct 115113 GTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATTTTCTGG 115172 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || | |||| ||||| |||| |||||||||| |||| || | ||| Sbjct 115173 CTCAAGAAGCGTGGCCTCATGCCCGGTCTTACCTTCTCCAATGAGCTCATCTCCCGTGAC 115232 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || ||||| || |||||| || ||| | ||||| Sbjct 115233 GAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTT 115267 >seq25 Length=276129 Score = 86.0 bits (94), Expect = 1e-11 Identities = 181/270 (67%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832 ||| | || || ||||| || || || | || ||||| ||||| ||| | || Sbjct 147720 ATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCAAGTCTTCAATGT 147661 Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892 || ||||| |||||||| || ||||| | | | | | ||||||||||| || | || Sbjct 147660 GTCGTAAATTCCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAAGATAACTG 147601 Query 94893 GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 || | | || || || || || || || |||||||| || || | | ||| Sbjct 147600 GGCTTGGGGCGTGCCGGCGTTGAAGAGAGTAGGTGAAGCATGAGTGAAGAATTTGGACGA 147541 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012 ||| |||| || || ||||| || | | ||| || ||| |||||||| || Sbjct 147540 CATTAGATTGTACGTCTCAATCACCCGCTCAACGTCATCGCCCCAAATACCGACAGCGAC 147481 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCAAC 95042 |||||||||||||| |||||| ||||| || Sbjct 147480 ACGCATAATCATGTGCTGAGGTCGCTCGAC 147451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989576557400585