Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq25 230 3e-55 seq121 91.5 2e-13 >seq25 Length=276129 Score = 230 bits (254), Expect = 3e-55 Identities = 1138/1797 (63%), Gaps = 59/1797 (3%) Strand=Plus/Minus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||| ||||| || || | ||||| | || || | ||||||||| || || || || Sbjct 149216 GTGAACTGAATAGGTGCCGCTGCGGCCTGGGTTCGCAAATAGTACATGCCAGTCTTCAGG 149157 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT------GGAATAACTCGGATCT 62159 || || |||| || || ||||| ||||| | || |||| || ||| Sbjct 149156 CCAAGCTTCCAGCCAGTGAAGTGCATGCTCGTGATCTTCCCCATGGAA------GGCTCT 149103 Query 62160 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62219 ||||||||||||| ||| || |||||||||||||| || | || |||||||| Sbjct 149102 CGCATATGGATATTCAGAGACTGCGACTGATCGATGAAGGCACCTCGATCGGCAGCCATC 149043 Query 62220 TTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 62279 | | | || || | |||||||| | || || || | ||| ||||| || Sbjct 149042 TGGACCACGGTACGCTGGGAGATTTCCCATACGGTCTTGTAGAGGGCCTTGATATCCTCG 148983 Query 62280 GGAAGGTTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCA 62336 |||| | ||| |||| ||||| || ||||| || | || || | ||| || ||| Sbjct 148982 GGAATGCTTGGGATATTTTGAATAGAGCCACCTTCGGCGATGATGCGATTTTTCATCGAG 148923 Query 62337 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAA-GGAGATGC---GGGTTAACTACTTG 62392 || ||| | | ||| || | | ||||| || ||||| || || || Sbjct 148922 TCCGACCAAAGGC----CAAGGTCAACAAGATCCCGGAGAAGCCAGGGGTTGACGACCTG 148867 Query 62393 GAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTC 62452 ||| || || | ||| || | || |||||| || || || ||||| | | || Sbjct 148866 GAACTCGCCCGCCAAGACGCGTCGTTGGTAAATGTTCGATGTGTATGGTTCAAAGCATTC 148807 Query 62453 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62512 || || || | |||||||| || |||||| ||||| || |||| ||| | || || Sbjct 148806 GTTGTTCCCGAGAATTTGAGATGTGCTTGCAGTGGGCATGGGGGCCAACAAAAGGCTGTT 148747 Query 62513 TCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACG 62571 | | || | || | |||| | || || ||| ||||| ||||| || ||||| | Sbjct 148746 ACGGACGCCATGCTGCT-TGATCTGCTCCTTCAGAGCATCCCAGTTCCACAGGTCCGAGG 148688 Query 62572 GTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 62631 | ||| || || ||||| || | | | || || ||| | || | Sbjct 148687 GCTTGACATTCCACATGTCGTACTGGAGAATTCCTTGAGAGACGGGAGAGCCTTCGTACG 148628 Query 62632 TATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACT-CGCCTCTAATGCACCGTAATAA 62690 | ||| || || | || || || | | | || ||| || | || ||| || Sbjct 148627 TCGAATAGGGGCCCTGCTCCTTGGCGA-TCTCCATTGACGCTTCCAGAGCGGCGTGGTAG 148569 Query 62691 ATGGTTTCAAAGATCTTCTTATTTAGAT-CTTGTGCTTCCGGGCTATCAAATGGATAATT 62749 || || |||||||| | |||| || | | || || || ||| || || || Sbjct 148568 ATTGTCTCAAAGATTTGAGTATTGAGCTGCCTG-GCCTCGGGGGATTCGAAGGGCATGCG 148510 Query 62750 TAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62809 | | || || || ||||| |||||||| || || | ||| || || | || | | | Sbjct 148509 CAGGGCAAGGAAGGCATCCGCCAATCCTTGCACGCCCACACCAATGGGCCGGTGGCGCAT 148450 Query 62810 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62869 ||| | | || || | | || || || || | ||| || || ||||||||||| Sbjct 148449 ATTGCTGTTGCGGGCCTCCTGTACCGGGTAGTAGTTGACATCAATGATCTTATTGAGATT 148390 Query 62870 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA-TCGCCCATCTATTA 62928 || || | || ||| ||| || | ||||| ||| || | |||||| | | || Sbjct 148389 TCGAACGACGACCTTGGTCACTTCGTGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTA 148330 Query 62929 -----CAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATC 62983 | ||| | ||| |||| ||||||| || || || || || |||| | | | Sbjct 148329 GTCGACGAACGAGGGCAAGGCAAGCGATGCCAAGTTGCAAACCGCCACTTCATCCGGAGC 148270 Query 62984 CGCATATTGTATTATCTCAGTGCAAAGATTA---CTACACTTGATAGTTCCTAAATTTTG 63040 || || | || ||||| ||||| ||||| |||| |||||| || | || | Sbjct 148269 CGAGTACTCGATGATCTCGGTGCAGAGATTGGAGCTACG---GATAGTGCCAAGGTTCTT 148213 Query 63041 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 63100 ||| || ||||| ||| || ||||| ||||| ||||| ||| | || ||||| | Sbjct 148212 TTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAAAGGATTTCCTGTTTCGGT 148153 Query 63101 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT-ATCTC- 63158 ||||| || | || || | ||||| | ||||||| | || ||| | | | Sbjct 148152 CTGAGCCTCCAAGATGGCGTACCAGAGCTTTTGAGCCTTGAG---AGTCTTGCGACCGCG 148096 Query 63159 -CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAA 63217 | ||| | ||||| |||||| |||||||| || || | || | | | Sbjct 148095 GCCTTCCTTCTCGTACTTTTCATACAAAGCCTCGAACTCCTCACCATAGCAATCGGCAAG 148036 Query 63218 TCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 63277 | || ||||| | || ||||||| | ||| || |||| | | ||||| ||||| Sbjct 148035 GCCGGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCAACTCGCTTCAT 147976 Query 63278 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCC 63337 || ||||| |||||||| || || | || ||||| | | || | || || || || Sbjct 147975 GAAAAGATCGGGAATCCAGAGTGCGAGGAAGAGATCACGAGCTCGAATCTCTTCCTTACC 147916 Query 63338 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63397 ||||| ||| || | |||| | | | ||| | ||||| || || | ||| || Sbjct 147915 GTGGTTCTTGCGAAGGTCCAAGAACTCGAATACATCCGCGTGCCATGGCTCAAGGTAGAT 147856 Query 63398 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 63457 ||| | |||| || || || || || || || || | ||| || |||||||| || | Sbjct 147855 GGCAAAGGCTCCCGGGCGCTTATTACCGCCTTGGTCAACGTACCTGGCGGTGTTGTTGAA 147796 Query 63458 AACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCC 63517 || | | ||| |||||||| ||||| ||| | ||||| || |||| ||||| || Sbjct 147795 GACACGAAGCATGGGAATAATGCCGTTGGATGTTCCATTTGTCCCGGCAATATATGAGCC 147736 Query 63518 ACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63577 |||| ||||| | || || || || || || |||||||| ||||| | ||| Sbjct 147735 TGTGGCGCGAATGCGATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGC 147676 Query 63578 GCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAA 63637 ||| || || ||||| || || || || || || ||||| |||||| | || || Sbjct 147675 GCAAGTCTTCAATGTGTCGTAAATTCCCTCAATACTGTCATCCTTCATGTCGACGAGGAA 147616 Query 63638 ACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63697 || ||| | ||| | | || || || || || | ||||| ||||| || || Sbjct 147615 GCACGAAGATAACTGGGCTTGGGGCGTGCCGGCGTTGAAGAGAGTAGGTGAAGCATGAGT 147556 Query 63698 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT----AGCTGA--GTCTATATCCCA 63751 || |||| || | |||||||||||||||||| ||| | ||| || ||| Sbjct 147555 GAAGAATTTGGACGACATTAGATTGTACGTCTCAATCACCCGCTCAACGTC-ATCGCCC- 147498 Query 63752 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTT 63808 ||| || || ||||||||||| | |||||||||||||| || ||||| || Sbjct 147497 ----CAAATACCGACAGCGACACGCATAATCATGTGCTGAGGTCGCTCGACAATCTT 147445 >seq121 Length=116706 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| ||| ||| ||||||||||| | || | || || || || || || Sbjct 115258 CACGCGAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTAAGA 115199 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| ||||||||||| || ||||| || ||||| || || | ||| |||||| Sbjct 115198 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAG 115139 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33758 || || || || ||||| ||||||| || | || | | || ||| |||| Sbjct 115138 ATACCCTCGACGGCAGCGAAGGCAACGAGACGCTGAGCGAAGGTGGCCTCGCGGTCAGCA 115079 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTT 33787 ||||| ||||||| ||||||||||| Sbjct 115078 ATCCAGCGGAGAGCCCAGTCGGCCTTCTT 115050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629812978713360