Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq25 226 4e-54 >seq25 Length=276129 Score = 226 bits (250), Expect = 4e-54 Identities = 704/1071 (66%), Gaps = 38/1071 (4%) Strand=Plus/Minus Query 71515 AACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATT 71574 || || || || |||||||| ||||| | ||| || || | ||| | | |||| | || Sbjct 148499 AAGGCATCCGCCAATCCTTGCACGCCCACACCAATGGGCCGGTGGCGCATATT-GCTGTT 148441 Query 71575 TCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTAT 71633 | | | || | | || || || || | ||| || || ||||||||||||| || | Sbjct 148440 GCGGGCCTCCTGTACCGGGTAGTAGTTGACATCAATGATCTTATTGAGATTTCGAACGAC 148381 Query 71634 TACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA-TCTCCCATCTATTA-----CAAA 71687 || ||| ||| || | ||||| ||| || | || ||| | | || | || Sbjct 148380 GACCTTGGTCACTTCGTGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTAGTCGACGAA 148321 Query 71688 CACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTG 71747 | | |||||||| ||||||| || ||||| || || |||| | | | | || | Sbjct 148320 CGAGGGCAAGGCAAGCGATGCCAAGTTGCAAACCGCCACTTCATCCGGAGCCGAGTACTC 148261 Query 71748 TATAATTTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAAATTTTGTTGATTACT 71804 || || || ||||| ||||| |||| ||| || || | || | ||| || || Sbjct 148260 GATGATCTCGGTGCAGAGATTGGAGCTACG---GATAGTGCCAAGGTTCTTTTGGTTGCT 148204 Query 71805 CTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTC 71864 ||| ||| || ||||| ||||| || || ||| | || ||||| |||||| || Sbjct 148203 CTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAAAGGATTTCCTGTTTCGGTCTGAGCCTC 148144 Query 71865 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGT-ATCTCTT--TTCTCT 71921 | || || | ||||| | ||||||| | | ||||| | | | ||| | Sbjct 148143 CAAGATGGCGTACCAGAGCTTTTGAGCCTTGAG---AGTCTTGCGACCGCGGCCTTCCTT 148087 Query 71922 TTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCA-AGCATT-GTCTAATCCAGGA 71979 ||||| | | ||| || |||||||| ||| ||| |||| | | | | || || Sbjct 148086 CTCGTACTTTTCATACAAAGCCTCGAACTC--CTCACCATAGCAATCGGCAAGGCCGGGG 148029 Query 71980 CATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGTTTCATAAAGA 72037 ||||| || || ||||||| | ||| || || | || ||| ||||| ||||| || | Sbjct 148028 CATTCGTTGGGGCACATCAGGGTCCAGTCGCCGT--TCTTTTCAACTCGCTTCATGAAAA 147971 Query 72038 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 72097 |||| |||||||| || || | || ||||| | | || | ||| || || || | Sbjct 147970 GATCGGGAATCCAGAGTGCGAGGAAGAGATCACGAGCTCGAATCTCTTCCTTACCGTGGT 147911 Query 72098 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 72157 |||| ||| || | |||| | | | ||| | ||||| || || | ||| ||||| | Sbjct 147910 TCTTGCGAAGGTCCAAGAACTCGAATACATCCGCGTGCCATGGCTCAAGGTAGATGGCAA 147851 Query 72158 TAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 72217 ||||||| || || || || || || || | ||| || |||||||| || | || | Sbjct 147850 AGGCTCCCGGGCGCTTATTACCGCCTTGGTCAACGTACCTGGCGGTGTTGTTGAAGACAC 147791 Query 72218 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 72277 | ||| |||||||| || ||||||| ||||| ||||||| ||||| || ||| Sbjct 147790 GAAGCATGGGAATAATGCCGTTGGATGTTCCATTTGTCCCGGCAATATATGAGCCTGTGG 147731 Query 72278 CACGAAT---ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 72334 | ||||| || | | |||| | || || || || |||||||| ||||| | ||||| Sbjct 147730 CGCGAATGCGATGGATG-TTGA--GGCCGATGCCACCGGCCATTTTTGAGATCATTGCGC 147674 Query 72335 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 72394 | || || || || || || ||||| ||||| |||||| |||||| | || || | Sbjct 147673 AAGTCTTCAATGTGTCGTAAATTCCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGC 147614 Query 72395 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 72454 | ||| | ||| | || || || || || | ||||| ||||| || || | Sbjct 147613 ACGAAGATAACTGGGCTTGGGGCGTGCCGGCGTTGAAGAGAGTAGGTGAAGCATGAGTGA 147554 Query 72455 ACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG--ATG 72512 | |||| |||| |||||||||||||||||| | || | | ||| | Sbjct 147553 AGAATTTGGACGACATTAGATTGTACGTCTCAATCACCCGCTCAACGT--CATCGCCCCA 147496 Query 72513 TATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTT 72563 || || || ||||||||||| | ||| |||||||||| || || ||||| Sbjct 147495 AATACCGACAGCGACACGCATAATCATGTGCTGAGGTCGCTCGACAATCTT 147445 Score = 89.7 bits (98), Expect = 7e-13 Identities = 343/535 (64%), Gaps = 13/535 (2%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || |||||||| || | | |||||| | || || | |||||||||||| || || || Sbjct 149216 GTGAACTGAATAGGTGCCGCTGCGGCCTGGGTTCGCAAATAGTACATGCCAGTCTTCAGG 149157 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920 || || |||| || || ||||| ||||| | || | ||| || || Sbjct 149156 CCAAGCTTCCAGCCAGTGAAGTGCATGCTCGTGATCTTCCCCATGGAAGGCTCTCGCATA 149097 Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 || ||||||| ||||| |||||||||||||| || | || |||||||| | | Sbjct 149096 TGGATATTCAGAGACTGCGACTGATCGATGAAGGCACCTCGATCGGCAGCCATCTGGACC 149037 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040 | || || | |||||||| | || || || | ||| ||||| || |||| | Sbjct 149036 ACGGTACGCTGGGAGATTTCCCATACGGTCTTGTAGAGGGCCTTGATATCCTCGGGAATG 148977 Query 71041 TTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTC 71097 ||| |||| ||||| || ||||| || || || || | |||||| ||| || | Sbjct 148976 CTTGGGATATTTTGAATAGAGCCACCTTCGGCGATGATGCGATTTTTCATCGAGTCCGAC 148917 Query 71098 CATAATTTTCTCTCGGTTAA----AACTCTAAGGAGATGAGGATTAACTACTTGAAATTC 71153 || | | ||| || | | | || || || || || || || || || Sbjct 148916 CAAA----GGCCAAGGTCAACAAGATCCCGGAGAAGCCAGGGGTTGACGACCTGGAACTC 148861 Query 71154 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATT 71213 || | ||| || | || |||||| || || || ||||| | | || || || Sbjct 148860 GCCCGCCAAGACGCGTCGTTGGTAAATGTTCGATGTGTATGGTTCAAAGCATTCGTTGTT 148801 Query 71214 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAG 71273 || | |||||||| || |||||| ||||| || |||| ||| || || || | | Sbjct 148800 CCCGAGAATTTGAGATGTGCTTGCAGTGGGCATGGGGGCCAACAAAAGGCTGTTACGGAC 148741 Query 71274 ACCATG-TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGG 71327 ||||| || | ||| | || || |||| ||||| ||||| || ||||| || Sbjct 148740 GCCATGCTGCT-TGATCTGCTCCTTCAGAGCATCCCAGTTCCACAGGTCCGAGGG 148687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671134275516120