Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq25 161 1e-34 seq121 149 9e-31 >seq25 Length=276129 Score = 161 bits (178), Expect = 1e-34 Identities = 333/493 (68%), Gaps = 2/493 (0%) Strand=Plus/Plus Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 |||||| || ||||| ||||| || || || || | ||| ||||| | || || ||| Sbjct 147814 TACGTTGACCAAGGCGGTAATAAGCGCCCGGGAGCCTTTGCCATCTACCTTGAGCCATGG 147873 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 |||||||| || || || || | || | ||||| ||| || |||||| ||| Sbjct 147874 CACGCGGATGTATTCGAGTTCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGATTCGA 147933 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 || | || | || ||||||||| | || ||| | ||||||||||| || | | Sbjct 147934 GCTCGTGATCTCTTCCTCGCACTCTGGATTCCCGATCTTTTCATGAAGCGAGTTGAAAAG 147993 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 ||| |||||| ||| ||||||||| || | ||||| || ||||||||| || Sbjct 147994 AACGGCGACTGGACCCTGATGTGCCCCAACGAATGCCCCGGCCTTGCCGATTGCTATGGT 148053 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGT 97165 || ||||| ||||| ||| |||||| | || ||||| || |||| | Sbjct 148054 GAGGAGTTCGAGGCTTTGTATGAAAAGTACGAGAAGGAAGGCCGCGGTCGCAAGAC-TCT 148112 Query 97166 CGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTA 97225 | | || | | | || ||| | |||||| || ||||||| || || |||| ||| | Sbjct 148113 CAAGGCTCAAAAGCTCTGGTACGCCATCTTGGAGGCTCAGACCGAAACAGGAAATCCTTT 148172 Query 97226 CATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAA 97285 ||| || |||||||| | || ||||| ||||||||| || | ||||| ||| Sbjct 148173 CATGCTTTACAAGGACCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGCACTATCCG 148232 Query 97286 GGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345 |||||||||| ||||| || || | |||||| | ||||||| || ||| ||||| Sbjct 148233 TAGCTCCAATCTCTGCACCGAGATCATCGAGTACTCGGCTCCGGATGAAGTGGCGGTTTG 148292 Query 97346 CGTTCTGGCATCG 97358 | |||||||| Sbjct 148293 CAACTTGGCATCG 148305 >seq121 Length=116706 Score = 149 bits (164), Expect = 9e-31 Identities = 211/292 (72%), Gaps = 10/292 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| |||||||||| ||||| ||||||| || ||||| | ||| ||| ||||||| Sbjct 114627 ATTTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTC 114686 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG----TTTAT 125134 |||||||| || |||| ||| | | | | ||| ||| ||||| || | Sbjct 114687 TCCAAGGATCTCCACGACTGGAACAACAAGCTCAATGA---TGA-CGAGAAGTATTTCGT 114742 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 ||||||||| | |||||||| |||| |||||| || ||||||||||| || || ||||| Sbjct 114743 CTCGCACATTCTTGCCTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTCGTTGA 114802 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCA 125253 |||||| ||| | || || |||| ||||| ||||| |||||||||| Sbjct 114803 G-CGATTCAGCGCCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAAATCA 114861 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||| |||||| | ||||| || | |||||| || ||||||| ||||| Sbjct 114862 TGATGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACCTACAT 114913 Score = 100 bits (110), Expect = 4e-16 Identities = 325/499 (65%), Gaps = 17/499 (3%) Strand=Plus/Plus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || ||||| | |||| | || ||||| | |||| | || | | | ||| Sbjct 115044 ATCCGCAAGAAGGCCGACTGGGCTCTCCGCTGGATTGCTGACCGCGAGGCCACCTTCGCT 115103 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | || || || ||||| ||||| ||||| |||||||| ||| ||||| || Sbjct 115104 CAGCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCC 115163 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 || || |||||||||||||| || ||||||||||| || || | || ||| | || Sbjct 115164 ATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTTACCTTCTCCAATGAGCTCATC 115223 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTG 125597 || || |||||||| || ||| ||||| || || ||||| || || || | | Sbjct 115224 TCCCGTGACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTTCTCCCACCTCAAGCAC 115283 Query 125598 CGTCCCGA-GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAG 125656 || ||||| |||| || || |||| ||| |||||| |||||||| | Sbjct 115284 CGCCCCGACAAGCAGCTC-----AT--CAAGGACAT---CATTGT---TGATGCCGTCAA 115330 Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAA 125716 ||| || || ||||| || || || |||| || | | | ||||||||| || Sbjct 115331 GATCGAGCAGGAGTTCCTCACTGAGGCCCTCCCCTGTGCCCTTCTCGGCATGAACGCGAA 115390 Query 125717 GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCG 125776 || ||| ||||||| || || || || || | || || || | | Sbjct 115391 CCTCATGAAGCAGTACATTGAATTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGAAACGA 115450 Query 125777 CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAA 125836 ||||| |||| || || ||||| || |||||| | ||| || || | || || Sbjct 115451 GAAGATCTACAGGTCCGCCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAA 115510 Query 125837 GACCAACTTTTTCGAGAAG 125855 ||||||||| ||||||||| Sbjct 115511 GACCAACTTCTTCGAGAAG 115529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741053762478120