Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 1e-12 >seq5 Length=463292 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || || || ||||||||||| || | | | ||||| | ||| Sbjct 253402 TGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTGC 253461 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | || | ||||||||||||| || || || || || || ||| ||| Sbjct 253462 TTACCAGCAAAGATAAGACGTTGTTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTTG 253521 Query 15281 CTCTTTACAATTTCTATGGTATCGCTAT-TTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| || | || ||||| || | || ||| || || | |||||| || || || || Sbjct 253522 GACTTGACGTTGTCGATGGTGTC-CGATGATTCAACTTCGAGGGTAATCGTCTTGCCGGT 253580 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || || ||||| |||||| Sbjct 253581 AAGAGTCTTCACGAAAATCTGCATA 253605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362176608947367