Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq5 143 6e-29 seq287 114 3e-20 >seq5 Length=463292 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||||| || ||||| ||||| || ||||| ||||| | ||||| Sbjct 253165 AGGACGAGATGGAGCGTAGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGGCCGTCC 253224 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || || ||||| || | ||| ||||| || || ||||| || || ||| Sbjct 253225 TCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGGATTCCCTCCTTGTCC 253284 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || ||||| || | ||||||| || || || || || ||||| ||| Sbjct 253285 TGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCGACTTCGAGCGTAATGGTC 253344 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || ||||| |||||||| Sbjct 253345 TTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 253376 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || || ||||| || || | || ||||| ||||| || ||| Sbjct 253408 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTGCTTACCA 253467 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || ||||| || || || |||||||||||||| | || Sbjct 253468 GCAAAGATAAGACGTTGTTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTG 253527 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || | ||| || || || ||||| ||||| || ||||| || Sbjct 253528 ACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCGGTAAGAGTC 253587 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 253588 TTCACGAAAATCTGCAT 253604 Score = 114 bits (126), Expect = 3e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||||||||| || ||||| || |||| ||||| || || || |||||| Sbjct 253946 GTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCA 254005 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | ||| ||||| || || || || || || ||||| ||||| | || Sbjct 254006 GCGAAAATCAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 254065 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || ||||| || || || ||||| ||||| | | || Sbjct 254066 ACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCAGTGACTATT 254125 Query 104543 T 104543 | Sbjct 254126 T 254126 >seq287 Length=44202 Score = 114 bits (126), Expect = 3e-20 Identities = 135/180 (75%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 ||||||||||| || ||||| || || | || || || || || ||||| || ||||| Sbjct 23321 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 23380 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 || | ||||||||| ||||| ||||| || || ||||||||||| | || ||||| || Sbjct 23381 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 23440 Query 104492 ACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | || || | ||| || ||||| || || || |||||||| || || || || ||||| Sbjct 23441 ATCGTGTC-CGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAA 23499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151389740404596