Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq5 107 2e-18 >seq5 Length=463292 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGT 48593 |||||| || || |||||||||| | | || || ||||||| |||||||| ||| || Sbjct 253185 CTCCTTCTGGATATTGTAATCAGAAAGAGTGCGGC-CGTCCTCAAGCTGCTTGCCGGCGA 253243 Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653 |||| | |||||||||||| || | | ||||||||| ||| ||| ||| | | Sbjct 253244 AAATGAGACGCTGCTGATCGGGGGGGATTCCCTCCTTGTCCTGAATCTTCGACTTCACAT 253303 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | |||||||||| |||||| |||| || ||||| || ||||| || || || | Sbjct 253304 TGTCGATGGTATCGGAAGACTCGACTTCGAGCGTAATGGTCTTGCCGGTAAGGGTCTTGA 253363 Query 48714 CAAAAATCTGCAT 48726 |||| |||||||| Sbjct 253364 CAAAGATCTGCAT 253376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248186342587