Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq22 179 6e-41 seq183 89.7 8e-14 >seq22 Length=299369 Score = 179 bits (198), Expect = 6e-41 Identities = 202/268 (75%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| |||||| || |||||||| || ||||||||||| || || Sbjct 88492 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 88434 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 88433 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 88374 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| ||||||| || || |||| ||| || || ||| ||||| Sbjct 88373 CCGTGGTGTCCTCAAGTCCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACCGA 88314 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||||| | || | |||||||| | || || || || Sbjct 88313 GCACGCCAAGCGCAAGACCGTCACCTCTCTCGACGTTGTCTATGCCCTTAAGCGCCAGGG 88254 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || ||||| || ||||| Sbjct 88253 CCGCACCCTCTACGGTTTCGGTGGTTAA 88226 >seq183 Length=81272 Score = 89.7 bits (98), Expect = 8e-14 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || ||||||| |||| |||| ||| ||||| |||||| || ||| |||| |||| Sbjct 35142 TGATCTATGAGGAGACGCGTGGCGTTCTGAAGTCTTTCCTCGAGGGCGTCATCCGCGATG 35201 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||||||||||||||| ||||| ||||| || || || | || | ||||| | Sbjct 35202 CAGTCACCTATACCGAGCACGCGAAACGGAAGACGGTGACGTCTCTCGACGTTGTCTACG 35261 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 | |||| || || || |||| | | || ||||| || Sbjct 35262 CCCTGAAGCGACAGGGACGTACGCTGTACGGTTTCGG 35298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074663301791