Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq25 145 7e-30 seq38 118 1e-21 seq5 118 1e-21 >seq25 Length=276129 Score = 145 bits (160), Expect = 7e-30 Identities = 607/940 (65%), Gaps = 26/940 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| ||||| || || || || | ||| || ||| | ||| Sbjct 148877 TTGACGACCTGGAACTCGCCCGCCAAGACGCGTCGTTGGTAAATGTTCGATGTGTATGGT 148818 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| | ||||| || || || ||||||| || |||| ||||||||| |||| | Sbjct 148817 TCAAAGCATTCGTTGTTCCCGAGAATTTGAGATGTGCTTGCAGTGGGCATGGGGGCCAAC 148758 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || | || || | ||| |||| |||||| | ||||| || | | |||| | ||| Sbjct 148757 AAAAGGCTGTTACGGACGCCATGCTGCTTGATCTGCTCCTTCAGAGCATCCCAGTTCCAC 148698 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | ||| | || | ||||||||||||||| | ||| || | | |||| | Sbjct 148697 AGGTCCGAGGGCTTGACATTCCACATGTCGTACTGGAGAATTCCTTGAGAGACGGGAGAG 148638 Query 145298 CCTT-GAAAG--GAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGA 145354 |||| | | | ||| || |||| ||||||| ||| ||| |||||| Sbjct 148637 CCTTCGTACGTCGAA---TAGGGGCCCTGCTCCTTGGCGATCTCCATTGACGCTTCCAGA 148581 Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414 ||| || || |||||||| ||||| | |||||| || | || || | ||| Sbjct 148580 GCGGCGTGGTAGATTGTCTCAAAGATTTGAGTATTGAGCTGCCTGGCCTCGGGGGATTCG 148521 Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474 | ||||||||||| | || ||||| || | || || | ||||| || |||||| Sbjct 148520 AAGGGCATGCGCAGGGCAAGGAAGGCATCCGCCAATCCTTGCACGCCCACACCAATGGGC 148461 Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGATAAT 145533 || || ||| ||||| | | ||| || | || || | | | || || || || Sbjct 148460 CGGTGGCGCATATTGCTGTTGCGGGCCTCCTGTACCGGGTAGTAGTTGAC-ATCAATGAT 148402 Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCG 145593 ||||| | ||||| || || ||||| || | | | | || |||||||| || Sbjct 148401 CTTATTGAGATTTCGAACGACGACCTTGGTCACTTCGTGGAGTTTCTCAAAGTCGTACTC 148342 Query 145594 AGCCTCGTCAACGACCACACAGCTATTG-ACGGCGATCGACGCCAAATTACAAACTGCCG 145652 ||| || | | || | | | | | ||| | ||| ||||| || ||||| ||| Sbjct 148341 GCCCTTGTTGTAGTCGAC-GAACGAGGGCAAGGCAAGCGATGCCAAGTTGCAAACCGCCA 148283 Query 145653 TCTCCT-CGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT---GCTACATTTGATG 145708 || | ||| | || ||| | | |||||||| ||| | ||| ||||| ||| Sbjct 148282 CTTCATCCGGAGCCG-AGTACTCGATGATCTCGGTGCAGAGATTGGAGCTAC---GGATA 148227 Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768 || || || || | || || || || | |||||| ||||||||| |||||| | || Sbjct 148226 GTGCCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAAAGGA 148167 Query 145769 CCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCT 145826 || || || ||| | ||||| ||| || || || | || || | Sbjct 148166 TTTCCTGTTTCGGTCTGAGCCTCCAAGAT--GGCGTACCAGAGCTTTTGAGCCTTGAGAG 148109 Query 145827 GCTGCTGGTAGCGGCCCTCTTCTTCGTA--TTTCCTGTAGAGCTCCTCAAACGCGGAACC 145884 || | |||||| || | ||||| |||| | | || |||| ||| | ||| Sbjct 148108 TCTTGCGACCGCGGCCTTCCTTCTCGTACTTTTCATACAAAG--CCTCGAACTCCTCACC 148051 Query 145885 GTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGC 145944 |||||||||| |||||||| || | |||||| |||||||| | ||| ||||||| Sbjct 148050 ATAGCAATCGGCAAGGCCGGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTTCTT 147991 Query 145945 GTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCG 145984 | || |||| ||| || | ||| || | ||| || ||| Sbjct 147990 TTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGTGCG 147951 >seq38 Length=234780 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | ||| |||||||| || |||||||| || Sbjct 18456 CCGCCACGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 18515 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||| ||||| || ||| Sbjct 18516 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGG 18575 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 18576 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 18635 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || || ||||| || || ||||| || |||||| Sbjct 18636 TCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATG 18683 >seq5 Length=463292 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || || || | ||| | || |||||||| || || |||||||| Sbjct 253149 GCCACCACGAAGGCGGAGGACGAGATGGAGCGTAGACTCCTTCTGGATATTGTAATCAGA 253208 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| |||||| ||||||||||| ||| | || | ||||||||| || || || Sbjct 253209 AAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGG 253268 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||| || ||||| || ||| ||| | | || | ||||||| ||||||| Sbjct 253269 GATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCGAC 253328 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || ||||| || || || || || |||||||| Sbjct 253329 TTCGAGCGTAATGGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 253376 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||| |||||||| |||||||||||||| Sbjct 253378 CCACCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAA 253437 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || || ||||| || || |||| | ||| || ||||| |||||| Sbjct 253438 AGGGTGCGGCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCGGGAGGG 253497 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||||| | || | || || | || || | Sbjct 253498 ATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAACT 253557 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| || || ||||| ||||| || |||||||||||||| Sbjct 253558 TCGAGGGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 253604 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || |||||||| || || ||||| ||| Sbjct 253606 CCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAG 253665 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| | || || || || ||||| ||||| Sbjct 253666 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGA 253725 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || |||| ||||||| Sbjct 253726 ATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACC 253785 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| ||| | ||| || ||||| || || || |||| Sbjct 253786 TCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGA 253822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009336606080