Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq5 111 1e-19 seq287 87.8 2e-12 >seq5 Length=463292 Score = 111 bits (122), Expect = 1e-19 Identities = 147/202 (73%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| | ||||| || ||||||| |||| || |||||||| ||||| ||||| Sbjct 253820 GTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGA- 253762 Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128 || || ||| || ||| ||||| || || ||||| ||||||||||| || | | Sbjct 253761 -CAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGA 253703 Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188 |||| |||||||| || | || |||| ||||| | ||| |||||||| || || | Sbjct 253702 TTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGG 253643 Query 25189 AATCCACGCTACATTTAGTGCT 25210 | |||||||| ||| | || || Sbjct 253642 AGTCCACGCTCCATCTGGTCCT 253621 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || |||| || ||||||| ||||| || Sbjct 253376 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACCATTACGCTCGAAGTCGAGTCTTCC 253317 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| ||||| | || | ||| ||||| || || || || || || || Sbjct 253316 GATACCATCGACAATGTGAAGTCGAAGATTCAG-GACAAGGAGGGAATCCCCCCCGATCA 253258 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||| |||||||| || | || || | |||||| | |||||||| Sbjct 253257 GCAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAA 253198 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || || ||||| ||| | || || Sbjct 253197 TATCCAGAAGGAGTCTACGCTCCATCTCGTCCT 253165 >seq287 Length=44202 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||| | || ||||| ||||||| | || || ||||| || ||||| ||| Sbjct 23499 TTTGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 23440 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || ||||| | || | ||| ||||| || || || || || || |||||||| | Sbjct 23439 GACAATGTGAAGTCCAAGATTCAG-GACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 23381 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 |||||| ||||| || || | || |||| ||||| | |||||||||||||| || Sbjct 23380 TATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAA 23321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433324899944405