Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq5 132 4e-26 seq38 125 6e-24 seq287 118 9e-22 >seq5 Length=463292 Score = 132 bits (146), Expect = 4e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| | ||||| || ||| | || || ||||| ||| | | Sbjct 253604 ATGCAGATTTTCGTGAAGACTCTTACCGGCAAGACGATTACCCTCGAAGTTGAATCATCG 253545 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| || |||||||| || || ||||| ||| Sbjct 253544 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGACCAA 253485 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || || || | || ||| ||||||| | || ||||||||| Sbjct 253484 CAACGTCTTATCTTTGCTGGTAAGCAACTGGAAGATGGCCGCACCCTTTCTGATTACAAC 253425 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || |||||| Sbjct 253424 ATTCAGAAGGAGTCCACC 253407 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || | || || ||||| || | || Sbjct 253376 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACCATTACGCTCGAAGTCGAGTCTTCC 253317 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || || ||||| ||||||||||| || || |||||||| Sbjct 253316 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGATCAG 253257 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| |||||| | || |||||||| Sbjct 253256 CAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAAT 253197 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 253196 ATCCAGAAGGAGTCTAC 253180 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || | |||| ||| | ||| || | || Sbjct 253808 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGACAATGTTAAGTCG 253749 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||||||||| || || |||||||| | || || |||||||| Sbjct 253748 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGATTTTCGCCGGCAAG 253689 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||||||| ||||||| ||||| || || || || ||||| Sbjct 253688 CAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCAC 253636 Score = 102 bits (112), Expect = 7e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || || || || | |||||| | ||| || |||| Sbjct 254118 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGTCG 254059 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| |||||||| || || || || || || || || Sbjct 254058 AAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAGCAGCGCCTGATTTTCGCTGGAAAG 253999 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||| ||| | || |||||||| ||||| || ||||||||| Sbjct 253998 CAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACC 253945 >seq38 Length=234780 Score = 125 bits (138), Expect = 6e-24 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| |||||||| || || || || |||| || || || |||| ||||| || || | Sbjct 18686 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 18627 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | | || || | ||| || |||| || || || ||||||||||| || || ||||| Sbjct 18626 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 18567 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||||| ||||| || || |||||||| ||| | ||||| ||||||| |||| || || Sbjct 18566 CCAACAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTA 18507 Query 22395 CAACATTCAAAAAGAATCCACC 22416 |||||| || || || |||||| Sbjct 18506 CAACATCCAGAAGGAGTCCACC 18485 >seq287 Length=44202 Score = 118 bits (130), Expect = 9e-22 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 |||||| || || | || ||||| || |||| ||||| || || || | || || | Sbjct 23500 TTTTGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 23441 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || | || || ||||| ||||||||||| || || ||||||||||| ||||| Sbjct 23440 CGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 23381 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| || ||||| || ||| | |||||| ||||||| | || |||||||| ||||| || Sbjct 23380 TATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAA 23321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419724997239655