Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq38 167 4e-36 seq5 161 2e-34 seq121 149 1e-30 seq287 125 1e-23 seq80 109 1e-18 >seq38 Length=234780 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || |||||||| || |||||||| || || ||| Sbjct 18456 CCGCCACGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 18515 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | ||||||||||| || Sbjct 18516 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGG 18575 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | |||||| ||||| ||||| | || || || Sbjct 18576 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 18635 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || ||||| |||||||||||||| || ||||| Sbjct 18636 TCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCAT 18682 >seq5 Length=463292 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || |||||||| || || ||||| ||||| || Sbjct 253378 CCACCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAA 253437 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || || || || || | |||||||||||| || Sbjct 253438 AGGGTGCGGCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCGGGAGGG 253497 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || |||||||| | ||||||| ||||||||||| | |||||| ||| Sbjct 253498 ATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAACT 253557 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| || || || || || || ||||| ||||| |||||||| Sbjct 253558 TCGAGGGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 253604 Score = 158 bits (174), Expect = 2e-33 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| || ||||||||||| || ||||| || || |||||| Sbjct 253606 CCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAG 253665 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || | || ||||||||| || ||| Sbjct 253666 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGA 253725 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||| || ||||||||||| | || || || Sbjct 253726 ATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACC 253785 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | ||||||||| || || || ||||||||||||| Sbjct 253786 TCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGA 253822 Score = 145 bits (160), Expect = 1e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | || || |||||||| | || | || ||||| ||||| || ||||| || | Sbjct 253142 TTTAGTGGCCACCACGAAGGCGGAGGACGAGATGGAGCGTAGACTCCTTCTGGATATTGT 253201 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||| || || || | || || || | |||||| |||||||| ||||| | || || | Sbjct 253202 AATCAGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGAT 253261 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 |||| || || || |||||||| |||||||| | ||| || |||||||| || | | Sbjct 253262 CGGGGGGGATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAG 253321 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || ||||| | || ||||| || || || ||||||||||| || |||||||| Sbjct 253322 ACTCGACTTCGAGCGTAATGGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 253376 >seq121 Length=116706 Score = 149 bits (164), Expect = 1e-30 Identities = 318/472 (67%), Gaps = 10/472 (2%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||| ||||||||||| || || || |||||||||||||| |||||| | Sbjct 115562 CATGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACC 115503 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 |||||| ||| |||||||||||| |||||||| ||| | | ||| || || Sbjct 115502 GAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCGGACCTGTAGATCTTCTCGTTTCC 115443 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | | ||| || ||||| || |||||||| |||| |||| || ||| Sbjct 115442 GAGGGCGACGAGCAGCCTGTCGGCGACGAATTCAATGTACTGCTTCATGAGGTTCGCGTT 115383 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | | ||||||| ||| || | ||| |||| ||| | ||| || Sbjct 115382 CATGCCGAGAAGGGCACAGGGGAGGGCCTCAGTGAGGAACTCCTGCTCGATCTTGACGGC 115323 Query 10175 TTCCTCGACGATGCTCTTTA----CCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 || | | |||| ||| | | | | ||| | || || ||| | || Sbjct 115322 ATCAACAATGATGTCCTTGATGAGCTGCTTGTCGGGGC----GGTGCTTGAGGTGGGAGA 115267 Query 10231 ACAGGA-GCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289 |||||| || | | || | | |||||| |||||||| ||| ||||| ||| ||||| Sbjct 115266 ACAGGAGGCACGCGAAGTCGGT-GTGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAG 115208 Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349 || |||||||||||||| || || || ||||||||||||| | || | ||| Sbjct 115207 AAGGTAAGACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCG 115148 Query 10350 GAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 ||| | | |||||| ||| | |||| ||||| |||| ||||||| Sbjct 115147 CTGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGCTGAGCGAAGG 115096 >seq287 Length=44202 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || || || ||||| || || || | ||||| || | |||||| |||||||| || Sbjct 23321 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 23380 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | ||||| ||||| || || || |||||||| |||||||| | ||| || ||| Sbjct 23381 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 23440 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || || | ||||||||| || ||||||||||||||||| || Sbjct 23441 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAA 23499 >seq80 Length=157687 Score = 109 bits (120), Expect = 1e-18 Identities = 660/1040 (63%), Gaps = 46/1040 (4%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | ||| ||| |||||| |||||| || || || |||||| Sbjct 107111 CGCCACTGGATGTACTCGGAGGGAGTCTTGTCCAAGTGGTTATCGATGTGCGCGAAAGCG 107052 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099 ||||| | ||| || || |||||||| |||| | | | | |||||| || Sbjct 107051 TGCTGCTTGATGTAGGCAATACGCATGTTCTCGTGCTGGTAGATCTCA--CCCGAGGTGG 106994 Query 225100 TTGTGC-CTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAA 225158 || ||| ||||||||||| |||||||| || | |||||| ||||| |||||||| | Sbjct 106993 GGATGAGCTCACCGGTGAGGACGTTGATGAGGGTGGACTTGCCGGCACCGTTGGGGCCGA 106934 Query 225159 TCACGCCAATCCGGGAT--GACATTGCAACCTGCGAGTTCACGTT-----GCTGAAGATC 225211 | ||| | || ||||| || ||| ||| || | | || |||| | | Sbjct 106933 TGACGGCGATACGGGAGCCGAGCGAGCA--CTGGAAGGTGATGTCCGTGAGCTGGGGCT- 106877 Query 225212 TCAGGG--CCAGTTTGGTAAGCAAAGGCCAC------GCCACGCAGCTTCATGATGGCAC 225263 ||| || || | |||| ||| || | |||| || ||||| Sbjct 106876 TCACGGTACCGG---GGTACTGGAAGCTCATCTTGGTGGCACGGAGA------ATGGCCT 106826 Query 225264 GGTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCG 225323 | |||||| | | |||||| ||||| |||||||||||||| ||| || ||| Sbjct 106825 TGGCCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGCTGAACTCCATCTCCG 106766 Query 225324 CGTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGT 225383 | | || |||||||| || ||| ||| | ||| ||||| | |||| Sbjct 106765 AGGCGCCGAGCTCGTAGTACGAGCGGGCCGAGGGGCACTTGCGGACGAACTCCTTGAGGT 106706 Query 225384 TTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACT 225442 | || || | | ||||||| | || |||| || | || ||| | | || Sbjct 106705 TACCCCTGTAGCGCTTAAGCTTGAAGCGCT---CGTAGTGGATGATGTGCTGGGTG-ACG 106650 Query 225443 GCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTT 225501 ||| ||||| |||| |||||||||||| |||||||| | || | | || | Sbjct 106649 TTGTCGAGGAAACCAGTGTCGTGGGACACGATGATGGAGGTGCAGG---GAGAGTTGAT- 106594 Query 225502 GAGGTGCGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCA 225560 ||||| || | |||||| ||||| | ||||||| ||||| || || ||||| | Sbjct 106593 GAGGTA-GTCCTCGAGCCACTTGACGTTCTTCACGTCCAAATGGTTGGTGGGCTCGTCGA 106535 Query 225561 GAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGC 225620 | || || || || | | | || || ||| || || | |||||||| ||||| | Sbjct 106534 GGAGGAGAATATCGGGAGCCTCGAAGACGGCACGGCACAGGGCGAGCTTCATCTTCCAAC 106475 Query 225621 CCCCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGA 225680 | ||||| |||| | ||| | | | | | ||| |||||| |||| | || Sbjct 106474 CACCGGAGAGGGCGGTGATCTCGCCCTGGATCATGGAGTCGGTGAAGCCGAACTCGACGA 106415 Query 225681 GCGTCTGGATAATGCGCTCGGGAGAGCTG-CGAG--CGGCAACGTTGGGGTCGGACGAGA 225737 || || ||| | | ||| ||||| | ||| |||| | | | | | | | Sbjct 106414 GCTGCTTGATGACGTCCTCCTGAGAGGTCTCGACACCGGCCTCCTGGAGCTTCTTCATGG 106355 Query 225738 GGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCG 225797 | || |||||| || | | | | ||| | |||||| || ||| | || | Sbjct 106354 TCCAGTCGATGGTGGTCATCTCAGTATCGGCAGAGTCCAAGTCGTGCTCGACGAAGACGG 106295 Query 225798 TCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCA 225857 || || || || | |||||||||||| | ||| | || || ||||| | | Sbjct 106294 TCTTGACCTCGGACTGCTTGGGGAAGCCCTCGACCTGCTCGTTGTTGATGGCACGCATGA 106235 Query 225858 GGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGT 225917 | ||| |||||| | |||||||||||| || || || | | || ||||||| | Sbjct 106234 GAGTAGACTTGCCGGAACCGTTGGGACCGCAAAGACCATAGCGCTGGCCACGCTTGAGGC 106175 Query 225918 TGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGC 225977 ||| | || ||| || || |||||| |||| ||||| || |||||| ||| | || Sbjct 106174 GGAGACCGGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCGAGAGAGAACGTGCAGTTGC 106115 Query 225978 ACAGGTCCTCACCCTCCTCG 225997 | |||||||| ||||||||| Sbjct 106114 AGAGGTCCTCGCCCTCCTCG 106095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921615637595640