Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5 136 9e-27 seq38 107 5e-18 seq287 84.2 5e-11 seq121 84.2 5e-11 >seq5 Length=463292 Score = 136 bits (150), Expect = 9e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || |||||||| | ||| || || |||||||| || || Sbjct 253147 TGGCCACCACGAAGGCGGAGGACGAGATGGAGCGTAGACTCCTTCTGGATATTGTAATCA 253206 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || ||||| ||||| || | || || || ||||| || |||||||| ||| Sbjct 253207 GAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGG 253266 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| || || ||||| || |||| ||||| || || || | |||| || || Sbjct 253267 GGGATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCG 253326 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| || ||||| ||||| || |||||||| || |||||||| Sbjct 253327 ACTTCGAGCGTAATGGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 253376 >seq38 Length=234780 Score = 107 bits (118), Expect = 5e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || ||||| || | ||| || || ||||| || ||||| | ||| ||||| ||||| Sbjct 18471 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 18530 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || |||||||||||||||||||| ||||| || || || ||| Sbjct 18531 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 18590 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || | || || || || || | || || || || || || ||||| ||| Sbjct 18591 TGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTC 18650 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||||||||| || ||||| Sbjct 18651 TTGCCCGTTAGGGTCTTGACGAAGATTTGCAT 18682 >seq287 Length=44202 Score = 84.2 bits (92), Expect = 5e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || || ||||| || || | || ||||| || || || | || ||||| ||||| || Sbjct 23321 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 23380 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||||||| |||||||| || || ||||| || || | ||||| || || Sbjct 23381 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 23440 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || || || || || ||||| ||||| || || || |||||||| || Sbjct 23441 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAA 23499 >seq121 Length=116706 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178 |||||| | ||| || |||| ||| | | |||| ||||| || | |||||||| Sbjct 115341 GAGTTCCTCACTGAGGCCCTCCCCTGTGCCCTTCTCGGCATGAACGCGAACCTCATGAAG 115400 Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTAC 269238 || || || |||||||| || || | | || || ||||| | ||||| | ||| Sbjct 115401 CAGTACATTGAATTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGAAACGAGAAGATCTAC 115460 Query 269239 AATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTC 269298 | || || ||||||| ||| ||||| || || |||| || ||||| |||||| Sbjct 115461 AGGTCCGCCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTC 115520 Query 269299 TTCGAAAAGCGTGTCAGCGACTATCA 269324 ||||| |||||||| | ||||| || Sbjct 115521 TTCGAGAAGCGTGTTGGTGACTACCA 115546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179645527892986