Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq25 185 9e-42 >seq25 Length=276129 Score = 185 bits (204), Expect = 9e-42 Identities = 604/924 (65%), Gaps = 16/924 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 |||||| | ||||| | |||||| || || || ||| |||||||| || | ||||| Sbjct 147385 AATTACCAATACTTCGGCTTCAAGACCCTCGAACGGTCATACCTCCTGAAACTCGATGGG 147444 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||||||| || || || | ||||| ||||| |||| ||| ||| | Sbjct 147445 AAGATTGTCGAGCGACCTCAGCACATGATTATGCGTGTCGCTGTCGGTATTTGGGGCGAT 147504 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 ||| | | || | | | | || ||| | ||| | || |||| | Sbjct 147505 GACGTTGAGCGGGTGATTGAGACGTACAATCTAATGTCGTCCAAATTCTTCACTCATG-C 147563 Query 93894 CACCCCGACCCTGTTCAACGCGGGGAC-CCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | || || || |||||||| || || ||| ||| ||| | |||||||| ||||| Sbjct 147564 TTCACCTACTCTCTTCAACGCCGGCACGCCCCAAGCC-CAGTTATCTTCGTGCTTCCTCG 147622 Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | ||| | |||| ||| || ||||||| ||||| | ||| || || | Sbjct 147623 TCGAC-ATGAAGGATGACAGTATTGAGGGAATTTACGACACATTGAAGACTTGCGCAATG 147681 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||||||| || || || ||||| ||| |||| | | || |||| || || Sbjct 147682 ATCTCAAAAATGGCCGGTGGCATCGGCCTCAACATCCATCGCATTCGCGCCACAGGCTCA 147741 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || || ||| || ||||| || ||||||||| | | || ||||| || ||||||||| Sbjct 147742 TATATTGCCGGGACAAATGGAACATCCAACGGCATTATTCCCATGCTTCGTGTCTTCAAC 147801 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || | ||||| ||||| || ||| | | | ||| | || || |||| Sbjct 147802 AACACCGCCAGGTACGTTGACCAAGGCGGTAATAAGCGCCCGGGAGCCTTTGCCATCTAC 147861 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || ||||| ||||||||||| || | ||| | ||||| || ||||||||||| || Sbjct 147862 CTTGAGCCATGGCACGCGGATGTATTCGAGTTCTTGGACCTTCGCAAGAACCACGGTAAG 147921 Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || |||| | || | || |||||| ||| |||||| | || || ||||| ||| Sbjct 147922 GA---AGAGATTCGAGCTCGTGATCTCTTCCTCGCACTCTGGATTCCCGATCTTTTCATG 147978 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 || || || || || ||| || ||||| || | || ||||| ||||| ||||| || Sbjct 147979 AAGCGAGTTGAAAAGAACGGCGACTGGACCCTGATGTGCCCCAACGAATGCCCCGGCCTT 148038 Query 94369 TCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAA 94427 |||| | ||| | || || | ||||||| ||||| | | ||| | Sbjct 148039 GCCGATTGCTATGGTGAGGAGTTCGAGGCTTTGTATGAAAAGTACGAGAAGGAAGGCCGC 148098 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 || | | ||| | | | ||| ||||| ||| | ||| |||| | ||| || Sbjct 148099 GGTC-GCAAGACTCTCAAGGCTCAAAAGCTCTGGTACGCCATCTTGGAGGCTCAGACCGA 148157 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 || || | || | ||| | | |||||| | ||| |||| |||| |||||| || Sbjct 148158 AACAGGAAATCCTTTCATGCTTTACAAGGACCACTG-CAACCGCAAGAGCAACCAAAAGA 148216 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 |||| || ||| ||||| ||||| ||||||||||| ||||||| | |||||| Sbjct 148217 ACCTTGGCACTATCCGTAGCTCCAATCTCTGCACCGAGATCATCGAGTACTCGGCTCCGG 148276 Query 94607 ACGAGATTGCTGTGTGTAACCTGG 94630 | || | || || || ||| ||| Sbjct 148277 ATGAAGTGGCGGTTTGCAACTTGG 148300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719569968520