Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq25 109 5e-19 seq5 87.8 2e-12 seq38 82.4 8e-11 >seq25 Length=276129 Score = 109 bits (120), Expect = 5e-19 Identities = 603/946 (64%), Gaps = 34/946 (4%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || |||||||||||||| || |||| || | || ||| | | Sbjct 148879 GGTTGACGACCTGGAACTCGCCCGCCAAGACGCGTCGTTGGTAAATGTTCGATGTGTATG 148820 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 |||||||| ||||||| || || || ||||||| ||| |||| || |||||| |||| Sbjct 148819 GTTCAAAGCATTCGTTGTTCCCGAGAATTTGAGATGTGCTTGCAGTGGGCATGGGGGCCA 148760 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 ||| | || || | ||| ||| ||| || | | ||||||| || | ||| | | Sbjct 148759 ACAAAAGGCTGTTACGGACGCCATGCTGCTTGA-TCTGCTCCTTCAGAGCATCCCAGTTC 148701 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 ||||| |||| || | | ||||||||||||||||| | | |||| || | ||||| Sbjct 148700 CACAGGTCCGAGGGCTTGACATTCCACATGTCGTACTGGAGAATTCCTTGAGAGACGGGA 148641 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTA-GCCTCGA 153324 ||| | |||| ||| ||| | | | || ||| | || || | || || | Sbjct 148640 GAGCCTTCGTACGTCGAATAGGGGCCCTGCTCCTT-GGCGATCTC-CATTGACGCTTCCA 148583 Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC--GCTTCTTCGCT 153382 | ||| | | ||| || || || |||||| ||||||| | ||| || || | Sbjct 148582 GAGCGGCGTGGTAGATTGTCTCAAAGATTTGAGTATTGAG--CTGCCTGGCCTCGGGGGA 148525 Query 153383 CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGAT 153442 ||| | ||||||||||| | ||||| || |||| || || | || || || || Sbjct 148524 TTCGAAGGGCATGCGCAGGGCAAGGAAGGCATCCGCCAATCCTTGCACGCCCACACCAAT 148465 Query 153443 GGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGAT 153502 ||| || || | |||||| | || | || || |||| ||| ||| || Sbjct 148464 GGGCCGGTGGCGCATATTGCTGTTGCGGGCCTCCTGTACCGGGTAGTAGTTGACATCAAT 148405 Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562 || || ||||| || || || || || || || | | | |||||||| || || || Sbjct 148404 GATCTTATTGAGATTTCGAACGACGACCTTGGTCACTTCGTGGAGTTTCTCAAAGTCGTA 148345 Query 153563 ---GGTCATTTCGTCGACGCGTACGCATCGA-TTCACGGCAATAGACGCCAGATTACAGA 153618 | | | | || | || ||| | ||| || ||||| || |||| || || | Sbjct 148344 CTCGCCCTTGTTGTAGTCG---ACG-AACGAGGGCAAGGCAAGCGATGCCAAGTTGCAAA 148289 Query 153619 CGGCCGTCTC-TTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTT 153677 | ||| || | ||| | || ||||| | |||||||| |||||| ||| || Sbjct 148288 CCGCCACTTCATCCGGAGCCG-AGTACTCGATGATCTCGGTGCAGAGATTGGAGCTACGG 148230 Query 153678 ATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTAC 153737 || ||| | || | || ||||| ||||| ||||| ||| ||| | |||||| | Sbjct 148229 ATAGTGCCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAAA 148170 Query 153738 GGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTA-TGCAGGTCCTGCGCTCGCAC 153796 || || || ||| || | || | ||| | || || | || || | Sbjct 148169 GGATTTCCTGTTTCGGTCTGAGCCTCCAAGAT-GGCGTACCAGAGCTTTTGAGCCTTGAG 148111 Query 153797 CCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCC 153856 || ||| |||||| || ||||||| || |||| ||| ||||| || || Sbjct 148110 AGTCTTGCGACCGCGGCCTTCCTTCTCGTACTTTTCATACAAAGCCTCGAACTCCTCACC 148051 Query 153857 GTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGC 153916 ||||| ||||| |||||||| || | | || |||||||| | ||| |||| | Sbjct 148050 ATAGCAATCGGCAAGGCCGGGGCATTCGTTGGGGCACATCAGGGTCCA------GTCGCC 147997 Query 153917 GTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCG 153956 ||| || || |||||| ||||| || | |||||| ||| Sbjct 147996 GTTCTTTTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGTGCG 147951 >seq5 Length=463292 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||| || | || || || || ||||| ||||| | | Sbjct 253411 GACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTGCTTACCAGCA 253470 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| ||||| |||||||| ||||| || || || || || ||| | || | || | Sbjct 253471 AAGATAAGACGTTGTTGGTCGGGAGGGATGCCCTCCTTATCC-TGAATCTTGGACTTGAC 253529 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| | | |||||| | || || || |||| || | ||| || || || ||||| | Sbjct 253530 GTTGT-CGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCGGTAAGAGTCT 253588 Query 138599 TTACAAAAATCTGCAT 138614 | || ||||||||||| Sbjct 253589 TCACGAAAATCTGCAT 253604 >seq38 Length=234780 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || | || | | | |||||||| || ||||||||||| Sbjct 18456 CCGCCACGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 18515 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| |||| |||||||||||||| || || Sbjct 18516 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGG 18575 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | ||||| | ||||| || Sbjct 18576 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG-TCGATCGTGTCCGAGGACTCGAC 18634 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || || || || || || || || || |||||| Sbjct 18635 CTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATG 18683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496258758674640