Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq5 116 4e-21 seq121 98.7 9e-16 seq38 91.5 1e-13 seq287 86.0 6e-12 >seq5 Length=463292 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | || | ||| | ||||||||| || || ||||||||||| Sbjct 253150 CCACCACGAAGGCGGAGGACGAGATGGAGCGTAGACTCCTTCTGGATATTGTAATCAGAA 253209 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || ||| | || | |||||||||||||| || Sbjct 253210 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGG 253269 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| || ||| ||| | | |||| ||| || | | ||||||| Sbjct 253270 ATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCGACT 253329 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || |||||||| || || || ||||| |||||||| Sbjct 253330 TCGAGCGTAATGGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 253376 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| |||||||| | ||||| ||| || || || || ||| Sbjct 253408 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTGCTTACCA 253467 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | || || || |||||||| ||||||||||| ||| || || |||| Sbjct 253468 GCAAAGATAAGACGTTGTTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTG 253527 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||||| || ||||||| ||| | ||| |||||||| ||||| Sbjct 253528 ACGTTG-TCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCGGTAAGAGT 253586 Query 127096 TTTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 253587 CTTCACGAAAATCTGCAT 253604 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||| ||| | ||| ||||| || || |||||||| ||| Sbjct 253606 CCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAG 253665 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || || ||| | |||||||| || || || ||||| Sbjct 253666 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGA 253725 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| ||| ||| | | |||| |||||| | |||||| Sbjct 253726 ATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACC 253785 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||| | || |||||||| || || || || Sbjct 253786 TCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 253820 Score = 100 bits (110), Expect = 3e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || |||||||||||||| | || || || || ||||| |||||| Sbjct 253946 GTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCA 254005 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | |||| |||||||||||||| || ||||||||||||||| ||| ||| |||| Sbjct 254006 GCGAAAATCAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 254065 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | | |||| ||| || | |||||| |||| ||| | || ||||| || Sbjct 254066 ACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 254118 >seq121 Length=116706 Score = 98.7 bits (108), Expect = 9e-16 Identities = 166/239 (69%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 47343 GACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAA 47402 ||||| ||| || |||||| || ||| |||||| || | ||||| || ||| Sbjct 115308 GACATCATTGTTGATGCCGTCAAGATCGAGCAGGAGTTCCTCACTGAGGCCCTCCCCTGT 115367 Query 47403 TCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGC 47462 | | | || ||||||||| | | |||| ||||||| ||||| ||||||||| | Sbjct 115368 GCCCTTCTCGGCATGAACGCGAACCTCATGAAGCAGTACATTGAATTCGTCGCCGACAGG 115427 Query 47463 CTGCTCGTTCAGCT---AAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTT 47519 |||||||| || ||| | ||||| ||| ||| || || ||||| || Sbjct 115428 CTGCTCGTCGCCCTCGGAAACGAG---AAGATCTACAGGTCCGCCAACCCCTTCGACTTC 115484 Query 47520 ATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 ||| | ||||| || |||| |||||||||||||| ||||||||||| || || || || Sbjct 115485 ATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 115543 >seq38 Length=234780 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || || Sbjct 18486 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 18545 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| ||||| || ||||| || ||||||||||||||| ||| || |||| Sbjct 18546 GCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 18605 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||||| |||||| || | ||| | || ||||| || || || Sbjct 18606 ACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTC 18665 Query 127097 TTTACAAAAATCTGCATG 127114 || || || || |||||| Sbjct 18666 TTGACGAAGATTTGCATG 18683 >seq287 Length=44202 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || |||||||||||||| | ||||| ||| || ||||| ||||| ||| | || Sbjct 23321 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 23380 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | ||||| ||||||||||| || |||||||||||| || || ||| | | ||| Sbjct 23381 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 23440 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | ||||||| |||||| || | ||| | || || || || || || || |||||| Sbjct 23441 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAAA 23500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497311012880