Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19]
587 sequences; 43,301,991 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 129 1e-24
seq38 114 3e-20
seq287 104 6e-17
>seq5
Length=463292
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || || |||||||| || | |||||| |||| | || | ||||||
Sbjct 253393 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCT 253452
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||| ||||| || || ||||| ||||| || ||||| ||| || || || |||
Sbjct 253453 TCCAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCGGGAGGGATGCCCTCCTTATCC 253512
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| |||||| | || ||| || || | || ||||||
Sbjct 253513 TGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTC 253572
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || ||||| ||||| ||||| ||
Sbjct 253573 TTGCCGGTAAGAGTCTTCACGAAAATCTG 253601
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| || ||||| || |||||||| |||| ||||| |||| | |||
Sbjct 253156 CGAAGGCGGAGGACGAGATGGAGCGTAGACTCCTTCTGGATATTGTAATCAGAAAGAGTG 253215
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||| |||||||| |||||||||||||| || || |||||
Sbjct 253216 CGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGGATTCCC 253275
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| |||||| |||| ||| || | | || || || | |
Sbjct 253276 TCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCGACTTCGAGC 253335
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || || ||||| || ||
Sbjct 253336 GTAATGGTCTTGCCGGTAAGGGTCTTGACAAAGATCTG 253373
>seq38
Length=234780
Score = 114 bits (126), Expect = 3e-20
Identities = 165/232 (71%), Gaps = 3/232 (1%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| |||||||| || |||||||| |||| ||||||||| | | ||
Sbjct 18462 CGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTG 18521
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||| ||||||||||| |||||||| ||||| || || ||
Sbjct 18522 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCC 18581
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || |||| ||||| | | || || || |
Sbjct 18582 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGG 18641
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCCT 199640
||||| ||||| ||||| || || || || || ||||| ||| || ||||
Sbjct 18642 GTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTG---CATGTTTGCCT 18690
>seq287
Length=44202
Score = 104 bits (114), Expect = 6e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| || | ||||| |||| | || | ||||| || ||||||||||||||||| |
Sbjct 23319 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 23378
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| |||||||| || || ||| ||||| || ||||||||||| |||||| |
Sbjct 23379 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 23438
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||||| | | || || || | ||||| |||||||||||||| || || ||||
Sbjct 23439 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAA 23498
Query 199620 AA 199621
||
Sbjct 23499 AA 23500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178912733404329
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |