Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq38 147 2e-30 seq5 125 8e-24 seq287 87.8 2e-12 >seq38 Length=234780 Score = 147 bits (162), Expect = 2e-30 Identities = 152/198 (77%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 18491 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 18550 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||| ||||||| || | || |||||||||| |||||| ||||| | Sbjct 18551 GATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 18610 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || || | |||||||| |||||||| || || || || Sbjct 18611 GTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 18670 Query 46582 AAAGATTTGCAT-TTTGC 46598 ||||||||||| ||||| Sbjct 18671 GAAGATTTGCATGTTTGC 18688 >seq5 Length=463292 Score = 125 bits (138), Expect = 8e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| ||||||||||| || || |||||||| |||| || Sbjct 253168 ACGAGATGGAGCGTAGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGGCCGTCCTCA 253227 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||||||| || | |||||||| |||| || | | |||||||||| Sbjct 253228 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGGATTCCCTCCTTGTCCTGA 253287 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||| | | | | || ||| || || || || | ||| ||||| ||| Sbjct 253288 ATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCGACTTCGAGCGTAATGGTCTTG 253347 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || |||||||| ||||| Sbjct 253348 CCGGTAAGGGTCTTGACAAAGATCTGCAT 253376 Score = 125 bits (138), Expect = 8e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||||||| | || |||||| ||||||||||||||||| || ||||| | || ||| Sbjct 253624 ACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCG 253683 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||||||| ||||| || || ||||| | || | | |||||||||| | Sbjct 253684 AGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGG 253743 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||| | | | | |||||| ||| || || || | |||||||| ||| Sbjct 253744 ATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTG 253803 Query 46565 CCCGTCAGCGTTTTAAC 46581 || || || || || || Sbjct 253804 CCGGTAAGGGTCTTGAC 253820 >seq287 Length=44202 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| || |||||||| || || || ||||| | || ||||||||||| |||||||| | Sbjct 23319 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 23378 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 | | ||||| || |||| || | | |||||||||| ||||| ||| | | Sbjct 23379 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 23438 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| || || || || | |||||||| || ||||| || || || |||| Sbjct 23439 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAA 23498 Query 46584 A 46584 | Sbjct 23499 A 23499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234252563240