Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq121 165 8e-36 seq38 138 1e-27 >seq121 Length=116706 Score = 165 bits (182), Expect = 8e-36 Identities = 329/481 (68%), Gaps = 10/481 (2%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | ||| ||| | ||| || || ||||||||| Sbjct 115528 TTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 115469 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 || | ||||| ||| | | |||| || ||||||||||||||||||| ||||| Sbjct 115468 GCGGACCTGTAGATCTTCTCGTTTCCGA---GGGCGACGAGCAGCCTGTCGGCGACGAAT 115412 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGC-AGCGCTT 132799 || ||||| ||| |||| | ||||| | | | || || || |||| || || || | Sbjct 115411 TCAATGTACTGCTTCATGAGGTTCGCGTTCATG-CCGAGAAGG-GCACAGGGGAGGGCCT 115354 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 | ||||| || |||||||| ||| || || | ||| ||| | | | || | Sbjct 115353 CAGTGAGGAACTCCTGCTCGATCTTGACGGCATCAACAATGATGTCCTTGATGAGCTGCT 115294 Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 | || || ||| | || ||||| | ||| || |||||| || | |||| Sbjct 115293 TGTCGGGGCGGTGCTTGAGGTGGGAGAACAGGAGGCACGCGAAGTCGGTGTGGAGACCCT 115234 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 |||| | ||| ||||| || ||| ||| || | |||||||||||||| || || |||| Sbjct 115233 CGTCACGGGAGATGAGCTCATTGGAGAAGGTAAGACCGGGCATGAGGCCACGCTTCTTGA 115174 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || |||| ||| || || ||||||| ||||||||||| ||||| || | Sbjct 115173 GCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGAAGGCAA 115114 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 | || |||| |||| ||||| || | || |||||||| || ||||| ||||||| Sbjct 115113 CGAGACGCTGAGCGAAGGTGGCCTCGCGGTCAGCAATCCAGCGGAGAGCCCAGTCGGCCT 115054 Query 133100 T 133100 | Sbjct 115053 T 115053 Score = 152 bits (168), Expect = 5e-32 Identities = 202/277 (73%), Gaps = 5/277 (2%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||||||||| |||||| || || | || ||||| | ||||||||| |||||| || Sbjct 114911 GTAGGTGTCAATGAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATTTGGAA 114852 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 ||||| ||||| || |||||| | ||| || || | || ||| ||||| || || | Sbjct 114851 ACCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCG-GCGCTGAATCGCTCAACGAGGT 114793 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | ||||||||||| |||||| ||||||||| ||||| || | |||| || ||||| Sbjct 114792 TCTCGTTGACGATACCGTCGGAGGCGGCGAAGAAGGCAAGAATGTGCGAGACGAAATACT 114733 Query 133346 GCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 ||||| || || | | | ||||||| | |||||||| || || | ||||| Sbjct 114732 TCTCGTCATCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCGATCTCCT 114673 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || ||||||| || || |||||||| || |||||||| Sbjct 114672 CGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 114636 >seq38 Length=234780 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| |||||||| ||||| || || || |||||||| ||||||||| | || |||||| | Sbjct 18686 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 18627 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | | |||| | | | | || || |||| ||||| ||||| || ||| |||| Sbjct 18626 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 18567 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| || || | ||| ||||| ||||| || |||| ||||||||| ||||| Sbjct 18566 CCAACAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTA 18507 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| ||||| | || || || | || || ||| | | ||||| Sbjct 18506 CAACATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGTCTTCGTGGCGG 18456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500169129982080