Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq282 376 3e-99 seq66 136 5e-27 seq5 105 8e-18 >seq282 Length=47922 Score = 376 bits (416), Expect = 3e-99 Identities = 688/1006 (68%), Gaps = 14/1006 (1%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||| || || |||||||||||||| || | || || Sbjct 1948 ATGGCGGCCTGGACGGCGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTG 2007 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 |||| || ||||| || || ||||| | | | || | ||||| || || || Sbjct 2008 GGTTCCTTGCCGTTGAAGTAGTCCGAGATGAGCTTCTGGACACGGGGGATACGGGTGGAG 2067 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 |||||||| | ||||| || | || | || || |||||||| | ||| || Sbjct 2068 CCACCGACGAGGACGATGTCGTGGACCTGGGACTTGTCGATCTTGGCGTCGGCGAGGACG 2127 Query 7202 TTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258 ||||| || | | | || ||||| | |||| || || ||||| ||||| Sbjct 2128 CGGTCGACGGGCTGAAGGGTGGAT---CGGAAGAGGTCCTGGCAGAGCTCCTCGAAACGG 2184 Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318 |||||||| ||||| || ||||| || | || ||| | | || || || || |||| Sbjct 2185 GCACGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGAGAGTCGATCTCGATGGAG 2244 Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378 || || || | |||||| | |||||||| || |||||||| || || || | || || Sbjct 2245 GTCTGGGCAGACGAAGAGAGGGTTCGCTTGGCACGCTCACAAGCGGTGCGGAGGCGGCGG 2304 Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAG 7438 || ||||| | ||| |||| ||| ||||| || || || || ||||| | |||| Sbjct 2305 AGCGCACGGGCGTTGGAAGAAAGATCCTTCTTGTGCTTGCGCTTGAACTCGTTGATGAAG 2364 Query 7439 TGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCT 7498 || | | || | || | |||||||||||| | ||| || || || ||||| || Sbjct 2365 TGCTGCACCAGGCGGTTGTCCATATCTTCACCACCAAGGTGAGTGTCACCAGCGGTAGCC 2424 Query 7499 TTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCC 7558 ||||| ||||||||||| | |||||| | | | || ||||| || ||||||||||| Sbjct 2425 TTGACCTCAAAGATACCATCCTCAATGGTGAGGAGGGAGACATCGAAAGTACCACCACCA 2484 Query 7559 AGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATA 7618 || || |||||||| ||||| || | || | ||||| ||||| ||||| ||||| Sbjct 2485 AGATCGAAAATGAGGACGTTGCGCTCACCCTCGTGCTTCTTGTCGAGGCCGTAGGCGATG 2544 Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 || || || || ||||| || || ||||| || ||| || || ||||| | || Sbjct 2545 GCAGCGGCGGTGGGTTCGTTGATGATACGGAGGACGTTGAGACCGGCAATGAGACCAGCG 2604 Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738 || || || || || || || |||||||| |||||||| |||||||| | ||| |||| Sbjct 2605 TCCTTGGTAGCCTGACGCTGAGAATCGTTGAAGTAGGCGGGGACCGTGATGACGGCGTTG 2664 Query 7739 GTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGAT 7798 || || | | || || || || || | ||| ||| ||||| |||| ||| | Sbjct 2665 GTCACGGTGGTGCCAAGGTAGCTCTCAGCAGTCTCTCGCATCTTGGTGAGAATCATGGCA 2724 Query 7799 GAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGT 7858 |||||||| || | | ||||| || || || || || || || || || | | ||| Sbjct 2725 GAAATCTCCTCGGGGGTGAACTGCTTGGTCTCGCCCTTGAACTCGACCTCGACGACGGGC 2784 Query 7859 TTATCCGCAGCAC----CGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGAC 7914 || || || | || | || | | || | | ||||| || | ||||| Sbjct 2785 TT----GCCGCTCTTGTCGTCCTTGACAGTGAAGGAGAAGTGCTTCATGTCAGCCTGGAC 2840 Query 7915 CTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGG 7974 || |||||| ||||||| ||| || |||||||| || || || |||||||| ||||| Sbjct 2841 CTCAGGGTCCGCGAACTTTCGTCCAATGAGACGCTTGGCGTCGAAGACTGTGTTCTTGGG 2900 Query 7975 GTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCA 8020 ||||||||| |||||||||||||| || ||||| ||||| ||| Sbjct 2901 GTTCATGGCGACCTGGTTCTTCGCCGCATCTCCGATGAGACGCTCA 2946 >seq66 Length=188146 Score = 136 bits (150), Expect = 5e-27 Identities = 361/544 (66%), Gaps = 13/544 (2%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG--AAATCAACGCCGTCGTATAACG 7301 || ||||| ||||| ||||||||||| || || | || || |||| || | | | Sbjct 185211 AGGTCCTCGAAACGGGCACGGGTAATC--TGCATGGCGAAGTCCTCGCCATCAAAGAGAG 185154 Query 7302 AATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 | ||||| |||||||| | || || || | || | || | ||| || ||||| || Sbjct 185153 AGTCAATCTCAATGGTGGCCTGGGCACCGCTG--GAAAGGGTCCTCTTGGCACGCTCGCA 185096 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 ||||| | | |||||| ||||| || |||| | | | || |||||| || || Sbjct 185095 AGCCGTCCTGAGACGACGGAGGGCGCGGGGGTCGCTGCTGAGGTCCTTCTTAGTCTTGCG 185036 Query 7420 TTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478 | ||||| | | |||| |||| ||| | | |||||| || | ||||| | | Sbjct 185035 GGTGAACTCCTTCTTGCAGTGATCGAGCAAGT-TGGTATCGAAGTCCTGGCCACCGAGAT 184977 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAA 7538 | ||||| || | || || ||||| |||| ||| || | ||||| | | |||| Sbjct 184976 GGGTATCACCGGAAGTAGCCTTGACGGTGAAGACACCGCCCTGGATGTTAAGAAGGGAAA 184917 Query 7539 CATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCT 7598 |||| || ||||||||||| || || | ||||| || || || | | | | || Sbjct 184916 CATCGAAAGTACCACCACCGAGATCGTAGATGAGGACATTTCGCTCCTTGCCGGTCTTGC 184857 Query 7599 TA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 | |||||||||| || ||||| || || || || || || || |||||||| || Sbjct 184856 CAGAGCCGAGACCGTAGGCAATAGCGGCGGCGGTAGGCTCGTTGATGATACGAAGGATGT 184797 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 | ||||||| ||| | | ||||| || || || || || || ||||| ||||||| Sbjct 184796 TGAGGCCAGAAATGGCACCGGCATCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGG 184737 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 | ||||| || | ||| || | | || ||||| || || | | || || || || | Sbjct 184736 CAGGGACAGTGATGACAGCCTTCTCAACCTTCTTGCCAAGCTTGGCCTCGGCAATCTCCT 184677 Query 7776 TCAT 7779 |||| Sbjct 184676 TCAT 184673 >seq5 Length=463292 Score = 105 bits (116), Expect = 8e-18 Identities = 193/278 (69%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAA---AATGAGTACGTTCGTATCGTCGTCT 7591 || ||||| || ||||||||||| || || | ||||| || | || ||| || | Sbjct 365022 GACACATCGAAAGTACCACCACCAAGATCGTAGACAATGA-TATGG-CGC-TCGCCGGCG 364966 Query 7592 TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 | | |||| || |||||||| |||||||| ||||| || || || || | ||||| || Sbjct 364965 TCGGTCTTGTCAAGACCGTAGGCGATAGCGGCCGCGGTGGGCTCGTTGACGATACGGAGG 364906 Query 7652 CAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAG 7711 ||| |||||||||||| | ||||| || || || || || || ||||| || Sbjct 364905 ACGTTAAGGCCAGCAATAACGCCGGCATCCTTGGTAGCCTGGCGCTGGTTGTCGTTGAAA 364846 Query 7712 TAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATA 7771 || || ||||| || ||||| |||| || || ||||| || || || || |||| Sbjct 364845 TAAGCGGGGACGGTGACGACGGCGTGGGTAACCTTCTTTCCAAGGTAGCCCTCGGCGACG 364786 Query 7772 TCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || ||||| ||| | || ||| | || ||||| || Sbjct 364785 TCCTTCATCTTGCCCAAAATCATAGCCGAGATCTCCTC 364748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128139713080