Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 8e-16 >seq5 Length=463292 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| ||||| ||| || || |||||||||||||| ||| | || |||| || | ||| Sbjct 253173 ATGGAGCGTAGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTG 253232 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| ||||| || || || ||||| ||||| | ||| | ||||||||||| |||||| Sbjct 253233 CTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGGATTCCCTCCTTGTCCTGAATCTT 253292 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || ||| | | | || || | ||| || || | |||||| || || || || Sbjct 253293 CGACTTCACATTGTCGATGGTATCGGAAGACTCGACTTCGAGCGTAATGGTCTTGCCGGT 253352 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | || || ||||| |||||||| Sbjct 253353 AAGGGTCTTGACAAAGATCTGCAT 253376 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||||||||||||||| || |||| |||| || | |||||| || || || Sbjct 253952 TCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAA 254011 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| ||||| ||||| | ||||| |||||||||||| Sbjct 254012 ATCAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTGTC 254049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380934874748601