Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq121 141 2e-28 >seq121 Length=116706 Score = 141 bits (156), Expect = 2e-28 Identities = 301/449 (67%), Gaps = 11/449 (2%) Strand=Plus/Plus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || ||||| ||||| || ||||| ||||| ||||||||| | ||||| ||| Sbjct 115105 AGCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCA 115164 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 | |||||||||||| || || ||||||||| || ||| ||||| ||||||||| Sbjct 115165 TTTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTTACCTTCTCCAATGAGCTCATCT 115224 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056 | | |||||||||||||||| || || || ||||| || | | | |||| | | Sbjct 115225 CCCGTGACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTTCTC---CCACCTCAAGC 115281 Query 26057 ACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115 || || |||| || | || | ||||| || || || |||||||| || Sbjct 115282 AC-CGCCCCGACAAGCAGCTCATCAAGGACATCATTGTTGATGCCGTCAAGATCGAGCAG 115340 Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175 ||||| | | ||||||||| | ||||||| Sbjct 115341 GAGTTCCTCACTGAGGCCCTCCCCTGTGCCCTTCTCGGCATGAACGCGAACCTCATGAAG 115400 Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCT 26233 || |||||||| | || |||||| ||||| || ||| || ||| || | ||| Sbjct 115401 CAGTACATTGAATTCGTCGCCGACAGGCTGCTCGTCGCC--CTCGGAAACGAGAAGATCT 115458 Query 26234 ACA-GTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAAC 26292 ||| || |||| ||||| |||||||| ||||| ||||| || | | || ||||||||| Sbjct 115459 ACAGGTCCGCC-AACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAAC 115517 Query 26293 TTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 ||||| || ||| | || || ||||| || Sbjct 115518 TTCTTCGAGAAGCGTGTTGGTGACTACCA 115546 Score = 102 bits (112), Expect = 2e-16 Identities = 164/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||||||||| ||||| ||||| Sbjct 114627 ATTTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTC 114686 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 ||||||| | ||| |||| || |||| || | |||||| || |||| || Sbjct 114687 TCCAAGGATCTCCACGACTGGAACAACAAGCTCAATG--ATGACGAGAAGTATTTCGTCT 114744 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | || | | || ||||| || ||||| || ||||| || |||||||| || ||| Sbjct 114745 CGCACATTCTTGCCTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTCGTTGAGC 114804 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||||| | || || ||| | |||||| || |||||||||||||| || Sbjct 114805 GATTCAGCGCCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAAAT 114859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928837984601280