Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19]
587 sequences; 43,301,991 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq5 129 4e-24
seq287 100 2e-15
>seq5
Length=463292
Score = 129 bits (142), Expect = 4e-24
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || || ||||| || || || || || ||||||| || ||
Sbjct 253383 ACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGT 253442
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | |||||| |||||||| |||||||| |||||||||||||| || ||||| || ||
Sbjct 253443 GCGGCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCGGGAGGGATGCC 253502
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||| || |||||||| ||||| || || || || | || | || ||| |
Sbjct 253503 CTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAA-CTTCGA 253561
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||||| || || ||||| |||||||| |||||||| ||
Sbjct 253562 GGGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAAATCTG 253601
Score = 107 bits (118), Expect = 1e-17
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||| ||||| ||||| ||||| || ||| || || ||| ||||||| || ||
Sbjct 253921 ACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGT 253980
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| | || ||||| ||||||||||| ||||| || || || ||||| || ||||| ||
Sbjct 253981 TCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGATCGGGGGGAATGCC 254040
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714
|||||||| || ||||| |||||| || || |||||||
Sbjct 254041 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAG 254084
>seq287
Length=44202
Score = 100 bits (110), Expect = 2e-15
Identities = 127/175 (73%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649
|| ||| ||||||| || || | | ||| || || |||||||| || |||||||||||
Sbjct 23326 AATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATAAGACG 23385
Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709
|||||||| ||||| ||||| |||||||| |||||||| || ||| || || ||
Sbjct 23386 CTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCGATCGT 23445
Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAA 480764
|| | | |||||||| || || ||||| ||||| ||||| || |||
Sbjct 23446 GTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAAA 23500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268154020721876
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |