Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq35 93.3 1e-13 >seq35 Length=244500 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| |||||||| || ||||| |||||||| ||||||||| Sbjct 18917 AGAATTTCCTTCAGACGTGGAACACCCAATGTAACGTT---CTTGGACGATACACCAGCA 18973 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||| ||||| || || | |||||| | ||||||||||| || ||||| | Sbjct 18974 AAATGGAATGTATTGAGCGTCATTTGAGTGGCAGGCTCACCAATGGACTGGGCCGCCAGA 19033 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 19034 ACACCAACCATTTCGCCAGG 19053 Score = 93.3 bits (102), Expect = 1e-13 Identities = 174/253 (69%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651 |||||| || || ||||| || | || || || || ||||| || ||||| | | Sbjct 19717 ACGACGTTGGATGTAACCCGTCTCGGCCGTCTTAACTGCAGTATCGATGAGACCTTCTCT 19776 Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTA-GCCCCCCAATAAAGGAGCTCT 302710 |||| |||| || |||||||| | ||| || |||| | || | | | ||| | | Sbjct 19777 ACCAGCCATGGCGTGGAAGAAGAACTCGGTTGG-CGTAAGACCACGGAGGTAAGAGTTTT 19835 Query 302711 CAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT 302770 | ||||| ||||| |||||||| || | || |||||| || || ||||| || | || Sbjct 19836 CGACGAACCCACGTGCCTCGGGGGAGTAATCATCCTTGGTGAAATGGGGCAGAGTTCGGT 19895 Query 302771 TCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCA 302830 || | ||| | || ||||||||||| || ||| ||||||| || | | || ||| Sbjct 19896 ACTTGAATCCGAAAGGAATACGCTTTCCTTCGACGATCTGCTGGCCGACGAGCGCCGTCA 19955 Query 302831 TCTGCGAAATATT 302843 | || ||||| || Sbjct 19956 TTTGGGAAATGTT 19968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471806530551819