Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19]
587 sequences; 43,301,991 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq35 93.3 1e-13
>seq35
Length=244500
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| |||||||| || ||||| |||||||| |||||||||
Sbjct 18917 AGAATTTCCTTCAGACGTGGAACACCCAATGTAACGTT---CTTGGACGATACACCAGCA 18973
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||| ||||| || || | |||||| | ||||||||||| || ||||| |
Sbjct 18974 AAATGGAATGTATTGAGCGTCATTTGAGTGGCAGGCTCACCAATGGACTGGGCCGCCAGA 19033
Query 301933 ATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 19034 ACACCAACCATTTCGCCAGG 19053
Score = 93.3 bits (102), Expect = 1e-13
Identities = 174/253 (69%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651
|||||| || || ||||| || | || || || || ||||| || ||||| | |
Sbjct 19717 ACGACGTTGGATGTAACCCGTCTCGGCCGTCTTAACTGCAGTATCGATGAGACCTTCTCT 19776
Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTA-GCCCCCCAATAAAGGAGCTCT 302710
|||| |||| || |||||||| | ||| || |||| | || | | | ||| | |
Sbjct 19777 ACCAGCCATGGCGTGGAAGAAGAACTCGGTTGG-CGTAAGACCACGGAGGTAAGAGTTTT 19835
Query 302711 CAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT 302770
| ||||| ||||| |||||||| || | || |||||| || || ||||| || | ||
Sbjct 19836 CGACGAACCCACGTGCCTCGGGGGAGTAATCATCCTTGGTGAAATGGGGCAGAGTTCGGT 19895
Query 302771 TCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCA 302830
|| | ||| | || ||||||||||| || ||| ||||||| || | | || |||
Sbjct 19896 ACTTGAATCCGAAAGGAATACGCTTTCCTTCGACGATCTGCTGGCCGACGAGCGCCGTCA 19955
Query 302831 TCTGCGAAATATT 302843
| || ||||| ||
Sbjct 19956 TTTGGGAAATGTT 19968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471806530551819
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |