Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq64 147 3e-29 seq154 140 4e-27 seq121 134 2e-25 seq25 113 6e-19 seq167 104 3e-16 >seq64 Length=189920 Score = 147 bits (162), Expect = 3e-29 Identities = 194/269 (72%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027 || ||||| || ||||||||||| ||||| | ||| ||||||||||||| || Sbjct 49768 GAAGCCGTACTAGAACTCAACGCCAGTGACGAAAGAGGCATCGACGTCGTGCGAAACCGA 49827 Query 1574028 ATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATC 1574087 |||||| | |||| |||| || |||||| ||||| ||||||||| | ||||| Sbjct 49828 ATCAAGGGCTTCGCCCAAAAGAAAGTCACCCTGCCCCCCGGTCGCCACAAGCTCGTCATC 49887 Query 1574088 CTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAA 1574147 |||||||| |||||| || | || |||| || || |||||||| || || |||||| Sbjct 49888 CTCGACGAAGCCGACAGCATGACCTCGGGCGCGCAACAGGCCCTCCGCCGAACGATGGAA 49947 Query 1574148 AAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAG 1574207 | || ||||||| ||||| || || | ||||||||| ||| | | |||||||| Sbjct 49948 ATCTACTCCAACACCACGCGGTTCGCGTTCGCGTGCAACCAGTCCAACAAGATCATCGAG 50007 Query 1574208 GCCCTCCAAAGTCGCTGCGCCATTCTGCG 1574236 |||| || || ||||| ||||| || Sbjct 50008 CCCCTGCAGTCCCGTTGCGCTATTCTCCG 50036 >seq154 Length=99992 Score = 140 bits (154), Expect = 4e-27 Identities = 270/397 (68%), Gaps = 6/397 (2%) Strand=Plus/Minus Query 18092 CCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGT 18151 ||| ||| || || || ||||| | |||||| |||||||||||| | || || Sbjct 76412 CCAGCTTCGGTGAATCCCACGGCAAAGCCGTCGGGTGCATCATCGACAACCCACCCCCCG 76353 Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211 ||||| | || |||| |||||||||| || ||| | | || ||||| |||||||| Sbjct 76352 GCATGACCCTCACCGAATCCGACATCCAACCCCAGCTCAACCGCCGCCGCCCGGGCCAAA 76293 Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271 || | | ||||||| ||| ||||| || ||||| | |||||| || ||||| || Sbjct 76292 GCTCCATCACCACGCCCCGCGACGAGAAAGACCGCGTAACCATCCAATCCGGCACCGAAT 76233 Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCG 18331 |||| || |||||| | || || ||||| | || ||| |||||||| ||| Sbjct 76232 TCGGCAAGACCCTCGGCACCCCTATCAGCCTCGTCGTCATGAACGAGGACCAGCGCCCCA 76173 Query 18332 TCGACTATTCCGACATGTGCAAGG-----TGCCGCGGCCC-TCACACGCCGACTACACCT 18385 ||||| | ||| | || || | || | |||| || || ||||||| ||||| Sbjct 76172 AGGACTACGGCAACAAGACCATGGACGTCTACCCCCGCCCTTCCCATGCCGACTTCACCT 76113 Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445 || | | || |||||||||||||| |||||||| || || ||||||| Sbjct 76112 ACCTCGAGAAATACGGCATCAAGGCCAGCAGCGGCGGAGGGAGGAGTAGCGCGCGCGAGA 76053 Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 | | |||||| || ||||| || ||||| ||||| Sbjct 76052 CTATTGCGCGCGTGGCGGCCGGTGCTGTCGCTGAGAA 76016 Score = 86.0 bits (94), Expect = 8e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 19048 ACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGC 19107 |||||| ||| ||||| || || ||||| || || ||||| | || |||||||||| Sbjct 75779 ACAGCACCGGTGGCACCGTCACCTGCGTCATCCGGAATGTGCCCTCGGGTCTCGGCGAGC 75720 Query 19108 CGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCA 19167 | |||||||||| |||||||| | | | |||||| ||| || ||||| ||| || Sbjct 75719 CCGCCTTTGACAAGCTCGAGGCCAAGATTGGCCACGCTATGATGAGCATCCCCGCCGTCA 75660 Query 19168 AGGGATTCGAGATTGGCAGCGGGTT 19192 ||| ||||| || ||| ||| || Sbjct 75659 AGGCCTTCGAAATCGGCTCCGGCTT 75635 >seq121 Length=116706 Score = 134 bits (148), Expect = 2e-25 Identities = 175/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||| ||||| Sbjct 115552 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATG 115493 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | | ||||| ||| ||| |||||| | || Sbjct 115492 TTCTCCATGAAGTCGAAGGGGTTGGCGGACCTGTAGATCTTCTCGTTTCCGAGGGCGACG 115433 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| | ||||||||| || || |||||||| ||||||| ||||||||||||| Sbjct 115432 AGCAGCCTGTCGGCGACGAATTCAATGTACTGCTTCATGAGGTTCGCGTTCATGCCGAGA 115373 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | ||| | | ||||| | |||||||| |||||| || || ||| Sbjct 115372 AGGGCACAGGGGAGGGCCTCAGTGAGGAACTCCTGCTCGATCTTGACGGCATCAACAATG 115313 Query 868931 AT 868932 || Sbjct 115312 AT 115311 >seq25 Length=276129 Score = 113 bits (124), Expect = 6e-19 Identities = 179/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| ||||| | || |||| ||| ||||| || |||||||| | | ||||||||| Sbjct 147824 TGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGAT 147765 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 || || || || || | || | ||| | |||||| | || | | |||| Sbjct 147764 GTTCCATTTGTCCCGGCAATATATGAGCCTGTGGCGCGAATGCGATGGATGTTGAGGCCG 147705 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 ||||| |||||| || ||||| | ||||| || | |||||||| || ||||| Sbjct 147704 ATGCCACCGGCCATTTTTGAGATCATTGCGCAAGTCTTCAATGTGTCGTAAATTCCCTCA 147645 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || ||| |||||||||| ||||| |||||||| || || | || | ||||||| Sbjct 147644 ATACTGTCATCCTTCATGTCGACGAGGAAGCACGAAGATAACTGGGCTTGGGGCGTGCCG 147585 Query 1630306 GCGTTGAAGAGCGTGGG 1630322 ||||||||||| || || Sbjct 147584 GCGTTGAAGAGAGTAGG 147568 >seq167 Length=90766 Score = 104 bits (114), Expect = 3e-16 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| | ||||| || ||||||||||| || || || | || |||||| | || |||||| Sbjct 49551 GCCTCAAACTATCTGGACATCAAGCCCCTACTGGACGTCGGTTGCAAGACAGTCGCCAAC 49492 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 ||||| ||||||||||| ||||| |||||||||||||| || || || Sbjct 49491 ATGATTAAGGGCAAGTCCCCCGACGAGATCCGCAAGACTTTCAATAT 49445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107091028031079