Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq25 223 3e-53 seq5 100 3e-16 seq287 89.7 5e-13 >seq25 Length=276129 Score = 223 bits (246), Expect = 3e-53 Identities = 978/1533 (64%), Gaps = 60/1533 (4%) Strand=Plus/Minus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | |||||| || || || ||||| || || || ||||||||| ||| | || Sbjct 148878 GTTGACGACCTGGAACTCGCCCGCCAAGACGCGTCGTTGGTAAATGTTCGATGTGTATGG 148819 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||||| |||||||||| || ||||| |||| ||| | || || |||||| |||| Sbjct 148818 TTCAAAGCATTCGTTGTTCCCGAGAATTTGAGATGTGCTTGCAGTGGGCATGGGGGCCAA 148759 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 |||||| || || | || || ||||||| | ||||| || | ||||| ||| Sbjct 148758 CAAAAGGCTGTTACGGACGCCATGCTGCTTGATCTGCTCCTTCAGAGCATCCCAGTTCCA 148699 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 || || || || |||||||| |||||||| | ||||| | ||||| Sbjct 148698 CAGGTCCGAGGGCTTGACATTCCACATGTCGTACTGGAGAATTCCTTGAGAGACGGGAGA 148639 Query 138741 GCCTTCGTACGAATCGTATACA--CCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGC 138798 ||||||||||| ||| ||| || ||| | || | ||| | ||| || || Sbjct 148638 GCCTTCGTACG--TCGAATAGGGGCCCTGCTCCTTGGCGATCTCCATTGACGCTTCCAGA 148581 Query 138799 GCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCG 138858 || | | ||| || || || || || ||||||| | |||||||| | ||| Sbjct 148580 GCGGCGTGGTAGATTGTCTCAAAGATTTGAGTATTGAGCTGCCTGGCCTCGGGGGATTCG 148521 Query 138859 TACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGG 138918 | |||||||| || ||| || || |||| |||||||||||||| || | || Sbjct 148520 AAGGGCATGCGCAGGGCAAGGAAGGCATCCGCCAATCCTTGCACGCCCACACCAATGGGC 148461 Query 138919 CGATGGCGCAGATTTGACGCTTTTGCGG--CTTCGATA--GGATAATAGTTTACATCGAT 138974 || ||||||| ||| ||| |||||| || | || || || ||||| ||||| || Sbjct 148460 CGGTGGCGCATATT----GCTGTTGCGGGCCTCCTGTACCGGGTAGTAGTTGACATCAAT 148405 Query 138975 GATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTA 139034 ||| || || | |||||| ||||| ||||| ||| | | | | ||||| ||||| Sbjct 148404 GATCTTATTGAGATTTCGAACGACGACCTTGGTCACTTCGTGGAGTTTCTCAAAGTCGTA 148345 Query 139035 TGTGCCCCCGTTGTCGTCGACG-ACGTCGACAAATTTGTTGACACAAATCGAGGCTATGT 139093 |||| ||||| ||||||| ||| | ||| | | || ||| || | || Sbjct 148344 CTCGCCCTTGTTGTAGTCGACGAACGAGGGCAA-------GGC---AAGCGATGCCAAGT 148295 Query 139094 TGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATT---AC 139150 |||| ||||||||||| || || | ||| |||| || |||| || | ||| | Sbjct 148294 TGCAAACCGCCACTTCATCCGGAGCCGAGTACTCGATGATCTCGGTGCAGAGATTGGAGC 148235 Query 139151 TACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAA 139210 ||| ||| || || | || | ||| ||||| || ||||| || || ||||||| Sbjct 148234 TAC---GGATAGTGCCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAA 148178 Query 139211 GCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCT-- 139268 |||| | || | || ||||| || | ||| | ||| | || || | | Sbjct 148177 GCATGAAAGGATTTCCTGTTTCGGTCTGAGCCTCCAAGATG---GCGTACCAGAGCTTTT 148121 Query 139269 -AGCTT---GTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGT 139324 ||| | | | | || || | | || |||||||||||| || | | | Sbjct 148120 GAGCCTTGAGAGTCTTGCGACCG---CGGCCTTCCTTCTCGTACTTTTCATACAAAGCCT 148064 Query 139325 CGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACC 139384 |||| ||||| ||| || | ||| || | || | || || ||||| || | || Sbjct 148063 CGAACTCCTCACCATAGCAATCGGCAAGGCCGGGGCATTCGTTGGGGCACATCAGGGTCC 148004 Query 139385 ATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCA 139444 | |||||||| | || ||| ||||||| ||||| |||||||| | |||| | | Sbjct 148003 AGTCGCCGTTCTTTTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGTGCGAGGAAGA 147944 Query 139445 AATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAA 139502 ||| || || | |||||| ||| ||| || | | || | ||| || || Sbjct 147943 GATCACGAGCTCGAATCTCTTCCTTACCGTGGTT--CTTGCGAAGGTCCAAGAACTCGAA 147886 Query 139503 AACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACC 139559 || || ||||||||||| || || |||||||| | || || || || || || Sbjct 147885 TACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTACCGCC 147826 Query 139560 TTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGC 139619 ||| || |||| | | | || ||||| || || | ||| || | ||| | | Sbjct 147825 TTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGA 147766 Query 139620 TGTTCCGTTGGT----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGA 139675 |||||| || || || | ||| | |||| ||| || | | ||| | |||| Sbjct 147765 TGTTCCATTTGTCCCGGCAATATATGAGCCTGTGGCG----CGAATGCGATGGATGTTGA 147710 Query 139676 TGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATAC 139735 |||||| || ||| | | ||| || || | ||||| ||||| ||||| || | Sbjct 147709 GGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCAAGTCTTCAATGTGTCGTAAATTC 147650 Query 139736 CTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCG 139795 | || ||||| |||| ||| ||| || ||||| || || | || | | | || Sbjct 147649 CCTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAAGATAACTGGGCTTGGGGCG 147590 Query 139796 TGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGT 139855 ||||||| || |||||||| || || ||||| | || |||||| | | || Sbjct 147589 TGCCGGCGTTGAAGAGAGTAGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGATTGT 147530 Query 139856 ACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCA 139915 |||| || || | | | ||| || || |||||||||| ||| ||||| | || Sbjct 147529 ACGTCTCAATCACCCGCTCAACGTCATCGCCCCAAATACCGACAGCGACACGCATAATCA 147470 Query 139916 TATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAG--ATAACCGTTCTCTAG 139973 | || || || ||| | | | || |||| ||| || || ||||| || || Sbjct 147469 TGTGCTGAGGTCGCTCGACAATCTTCCCATCGAGTTTCAGGAGGTATGACCGT--TCGAG 147412 Query 139974 GGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||||||| |||| ||||| || |||||||| Sbjct 147411 GGTCTTGAAGCCGAAGTATTGGTAATTGAAATC 147379 >seq5 Length=463292 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || |||||||||||||| || | || Sbjct 253376 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACCATTACGCTCGAAGTCGAGTCTTCC 253317 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || ||||| || |||||||| Sbjct 253316 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGATCAG 253257 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || || ||||| || ||||| ||||| | | | || ||||| || Sbjct 253256 CAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAAT 253197 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || ||||| || || || || Sbjct 253196 ATCCAGAAGGAGTCTACGCTCCA 253174 >seq287 Length=44202 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 24691 ACTGATTG-ATACGA-TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTC 24748 |||||||| || ||| || || | || | || || || || ||||| || || || || Sbjct 23521 ACTGATTGCATTCGAATGTAGTT--TTGTCAAGACCCTCACGGGTAAGACCATCACCCTT 23464 Query 24749 GAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGA 24808 || || || || | ||||| | || | || || ||||| || ||||| || ||| Sbjct 23463 GAGGTCGAGTCCTCGGACACGATCGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGA 23404 Query 24809 ATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC 24868 || |||||||||||||| ||| | || || ||||| || ||||| |||||| | | | Sbjct 23403 ATCCCTCCCGATCAACAGCGTCTTATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACC 23344 Query 24869 ATGTCAGATTATAACATTCAAAAGG 24893 | || ||||| || ||||| |||| Sbjct 23343 CTTTCTGATTACAATATTCAGAAGG 23319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894298876360