Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq64 165 1e-34 seq121 158 2e-32 seq167 98.7 2e-14 >seq64 Length=189920 Score = 165 bits (182), Expect = 1e-34 Identities = 306/446 (69%), Gaps = 16/446 (4%) Strand=Plus/Plus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062 || |||||||||||| || || | | | || ||| || | ||||| || || ||| Sbjct 49666 GAAGGCAACATGCCCCACGTCATCATCTCCGGAATGCCAGGTATCGGCAAAACGACAAGC 49725 Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGG---CCGTGCTCGAA 2019119 ||| ||||| || || || || || | |||| | ||| |||| || ||| Sbjct 49726 ATCCACTGCCTCGCACG---GCAATTACTCGGAGACGCCTATAAGGAAGCCGTACTAGAA 49782 Query 2019120 CTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCT 2019179 ||||| || ||||| | ||| | ||||||||||| | |||||| ||| Sbjct 49783 CTCAACGCCAGTGACGAAAGAGGCATCGACGTCGTGCGAAACCGAATCAAGG-----GCT 49837 Query 2019180 TCG---AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGG 2019234 ||| ||||||| || |||||| ||||| ||||||||| | |||||||||| || | Sbjct 49838 TCGCCCAAAAGAAAGTCACCCTGCCCCCCGGTCGCCACAAGCTCGTCATCCTCGACGAAG 49897 Query 2019235 CCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCA 2019294 ||||| || | || |||| || || ||||||||||| || ||||||| ||| ||| Sbjct 49898 CCGACAGCATGACCTCGGGCGCGCAACAGGCCCTCCGCCGAACGATGGAAATCTACTCCA 49957 Query 2019295 ACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGA 2019354 |||| |||||||| ||| | || |||||| ||| | | ||||||| |||| ||| Sbjct 49958 ACACCACGCGGTTCGCGTTCGCGTGCAACCAGTCCAACAAGATCATCGAGCCCCTGCAGT 50017 Query 2019355 GCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGC 2019414 ||||||||| || | || | |||| | || ||||| ||| | | | | | ||| Sbjct 50018 CCCGTTGCGCTATTCTCCGGTACTCGCGGTTAACGGACGCGCAGGTGGTCAAGAGGCTGA 50077 Query 2019415 GCGAGATTATCGACGCCGAAAAGGTC 2019440 |||| ||||| || ||||||||| Sbjct 50078 TGCAGATCATCGAGGCGGAAAAGGTC 50103 >seq121 Length=116706 Score = 158 bits (174), Expect = 2e-32 Identities = 198/270 (73%), Gaps = 4/270 (1%) Strand=Plus/Minus Query 793873 TCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAA 793932 |||||| || || | ||||||| ||||| || || || || ||| |||||| | Sbjct 115578 TCCTCTTAGTGCTGGCCATGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGA 115519 Query 793933 AGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGT 793992 ||||||||||||| |||| ||||| |||||| | ||| |||||||| | | || Sbjct 115518 AGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCGGACCTGT 115459 Query 793993 AGTGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTG 794050 || ||||||| ||||| ||||| ||||| | |||||||||||||||||||||||| Sbjct 115458 AGATCTTCTCGTTTCCGAGGGCGACG--AGCAGCCTGTCGGCGACGAATTCAATGTACTG 115401 Query 794051 GCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTC 794110 ||||||| ||||||||||||| || || ||| || | ||| ||| ||||| Sbjct 115400 CTTCATGAGGTTCGCGTTCATGCCGAGAAGGGCACAGGGGAGGGCCTCAGTGAGGAACTC 115341 Query 794111 TTTCTCGATCTCGACGGCCTCGATGATGAT 794140 | |||||||| |||||| || | ||||| Sbjct 115340 CTGCTCGATCTTGACGGCATCAACAATGAT 115311 Score = 104 bits (114), Expect = 4e-16 Identities = 97/121 (80%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 794548 GTGTCGATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGAT 794606 || || |||||| |||||||| ||||| || | | || ||||||| ||||||||| || Sbjct 114958 GTCTCAATGGCGTTGAAGAGGTGAGTCCT-CTGGGCGGGCTCCTTGATGTAGGTGTCAAT 114900 Query 794607 GAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 |||||| ||||||||||| ||||||||||| || || ||| ||||| || || ||||| Sbjct 114899 GAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAGCA 114840 Query 794667 G 794667 | Sbjct 114839 G 114839 >seq167 Length=90766 Score = 98.7 bits (108), Expect = 2e-14 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| | ||||| || |||||||||||||| || || | || |||||||| || |||||| Sbjct 49551 GCCTCAAACTATCTGGACATCAAGCCCCTACTGGACGTCGGTTGCAAGACAGTCGCCAAC 49492 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 | || ||||||||||| ||||| || ||||||||||| || || || Sbjct 49491 ATGATTAAGGGCAAGTCCCCCGACGAGATCCGCAAGACTTTCAATAT 49445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916183958132693