Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq38 145 5e-30 seq5 113 3e-20 seq287 105 4e-18 >seq38 Length=234780 Score = 145 bits (160), Expect = 5e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| ||||||||| ||||| |||||||| ||| |||| | || Sbjct 18471 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 18530 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| || || ||||| | || | ||||||||||| Sbjct 18531 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 18590 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | |||| || || |||||| |||| ||| |||||| Sbjct 18591 TGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTC 18650 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| |||||||| || ||||| |||||| Sbjct 18651 TTGCCCGTTAGGGTCTTGACGAAGATTTGCATG 18683 >seq5 Length=463292 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||||||||||||||| || || || ||| |||| |||| Sbjct 253393 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCT 253452 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||||||||| || || ||||| || ||||| ||||| | || | |||||||| || Sbjct 253453 TCCAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCGGGAGGGATGCCCTCCTTATCC 253512 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | || || || | ||| || ||| Sbjct 253513 TGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTC 253572 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || ||||| || || |||||||| Sbjct 253573 TTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 253604 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 |||||||| || | ||| ||||||||| || || ||||| || ||| |||| |||| Sbjct 253621 AGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCC 253680 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| |||| |||||| ||||| | || | ||||||||||| Sbjct 253681 TCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCC 253740 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || | |||||| || | ||| || Sbjct 253741 TGGATCTTCGACTTAAC--AT--TGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGAT 253796 Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965 |||||| || || |||||||| || Sbjct 253797 GGTCTTGCCGGTAAGGGTCTTGAC 253820 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| |||| ||||||||||| || || || || ||| | || | || Sbjct 253931 AGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCC 253990 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| ||||| ||||| || ||||| || | || | ||||||||||| Sbjct 253991 TCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTGTCC 254050 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| ||| || |||||| || | ||| || Sbjct 254051 TGGATCTTCGACTTGAC--AT--TGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGAT 254106 Query 34942 GGTCTTTCCCGTGA 34955 |||||| || |||| Sbjct 254107 GGTCTTGCCAGTGA 254120 >seq287 Length=44202 Score = 105 bits (116), Expect = 4e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||||||||| || || || || ||| |||| |||| || || |||||||||||||| | Sbjct 23319 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 23378 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 | || || || || || | || | ||||||||||| | || || || || Sbjct 23379 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 23438 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | |||| || || |||||| |||| ||| |||||||| |||||||||||||| |||| Sbjct 23439 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAA 23498 Query 34968 A 34968 | Sbjct 23499 A 23499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690469973353