Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq25 96.9 3e-15 seq5 84.2 2e-11 >seq25 Length=276129 Score = 96.9 bits (106), Expect = 3e-15 Identities = 606/959 (63%), Gaps = 28/959 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || ||||||||||||| || |||| | || | || ||| | || Sbjct 148877 TTGACGACCTGGAACTCGCCCGCCAAGACGCGTCGTTGGTAAATGTTCGATGTGTATGGT 148818 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 ||||| | || || || || | ||||| | ||| |||| || |||||| |||| | Sbjct 148817 TCAAAGCATTCGTTGTTCCCGAGAATTTGAGATGTGCTTGCAGTGGGCATGGGGGCCAAC 148758 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 || | || || | || | | ||| | ||||||| || | ||||| |||| Sbjct 148757 AAAAGGCTGTTACGGACGCCATGCTGCTTGATCTGCTCCTTCAGAGCATCCCAGTTCCAC 148698 Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTG 147132 | ||||||| | || |||||||||||||||||||| | |||| || | ||||| | Sbjct 148697 AGGTCCGAGGGCTTGACATTCCACATGTCGTACTGGAGAATTCCTTGAGAGACGGGAGAG 148638 Query 147133 CCAGCGAACGTAGTGTAG-----CT--TCCGTCGCGCTGCGCCAATTCACAGCTTGCCTC 147185 || || |||| | ||| || ||| | ||| | | || ||| || || || Sbjct 148637 CCTTCGTACGTCGAATAGGGGCCCTGCTCCTTGGCGAT-CTCC-ATTGAC-----GCTTC 148585 Query 147186 GAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCT 147245 || || | | ||| || || || |||||| | || || | || || | Sbjct 148584 CAGAGCGGCGTGGTAGATTGTCTCAAAGATTTGAGTATTGAGCTGCCTGGCCTCGGGGGA 148525 Query 147246 CTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGAT 147305 ||| | ||||| ||||| | |||||||| ||||| || || | || || || || Sbjct 148524 TTCGAAGGGCATGCGCAGGGCAAGGAAGGCATCCGCCAATCCTTGCACGCCCACACCAAT 148465 Query 147306 AGGTCGAT---GCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATC 147362 || || | || | | | || |||| || | || || |||| |||| ||| Sbjct 148464 GGGCCGGTGGCGCATATTGCTGTTGCG---GGCCTCCTGTACCGGGTAGTAGTTGACATC 148408 Query 147363 AATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATC 147422 ||| ||||| ||||| || || || || || || || | | | ||||||||| || || Sbjct 148407 AATGATCTTATTGAGATTTCGAACGACGACCTTGGTCACTTCGTGGAGTTTCTCAAAGTC 148348 Query 147423 ATA-AGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGA 147481 || ||| | || | || ||| | | || ||| | || |||| ||||| | Sbjct 148347 GTACTCGCCCTTGTTGTAGTCG-ACGAACGAGGGCAAGGCAAGCGATGCCAAGTTGCAAA 148289 Query 147482 CGGCCGTCTC-TTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTT 147540 | ||| || | ||| | || ||||| | ||| |||| ||| || ||| || Sbjct 148288 CCGCCACTTCATCCGGAGCCG-AGTACTCGATGATCTCGGTGCAGAGATTGGAGCTACGG 148230 Query 147541 ATGACTCCCAA-ATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTA 147599 || | | |||| || | || ||||| || || ||||| ||| ||| | |||||| | Sbjct 148229 AT-AGTGCCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAA 148171 Query 147600 CGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTA-TGCAGGTCCTGCGCTCGCA 147658 || || || ||| || | || | ||| | || || | || || | Sbjct 148170 AGGATTTCCTGTTTCGGTCTGAGCCTCCAAGAT-GGCGTACCAGAGCTTTTGAGCCTTGA 148112 Query 147659 CCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGC 147718 || ||| |||||| || || |||||| || ||||| ||| ||||| || | Sbjct 148111 GAGTCTTGCGACCGCGGCCTTCCTTCTCGTACTTTTCATACAAAGCCTCGAACTCCTCAC 148052 Query 147719 CGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCG 147778 | |||||||||||||||||||| || | | || |||||||| | ||| | ||| | Sbjct 148051 CATAGCAATCGGCAAGGCCGGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTTCT 147992 Query 147779 CGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCT 147837 | ||| || ||| || ||||| || | ||| || ||| | ||||| || ||| Sbjct 147991 TTTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGTGCGAGGAAGAGATCACGAGCT 147933 >seq5 Length=463292 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||| || | ||| || |||||| || || ||||| | | Sbjct 253411 GACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTGCTTACCAGCA 253470 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| ||||| || ||||| ||||| || ||||| ||| || || | Sbjct 253471 AAGATAAGACGTTGTTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACG 253530 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | | || ||||||| || | ||| || || || ||||| || Sbjct 253531 TTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCGGTAAGAGTCTTC 253590 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 253591 ACGAAAATCTGCAT 253604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476607702865320