Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq121 158 2e-32 seq64 138 2e-26 seq25 96.9 5e-14 >seq121 Length=116706 Score = 158 bits (174), Expect = 2e-32 Identities = 243/340 (71%), Gaps = 15/340 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||||||||| || ||||||||||||||| |||| | Sbjct 114626 GATTTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATC 114684 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| | || |||||| ||||| Sbjct 114685 TCTCCAAGGATCTCCACG----ACTGGAACAACAAGCTCAATGATGACGAGAAGTATTTC 114740 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || |||| | || ||||| || ||||||| ||| || ||||| ||||||||| | Sbjct 114741 GTCTCGCACATTCTTGCCTTCTT-CGCCGCCTCCGACGGTATCGTCAACGAGAACCTCGT 114799 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | |||||||| | || ||||| || | || ||||| ||||| || Sbjct 114800 TGAGCGATTCAGCGCCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAAAT 114859 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| ||||| || ||||||||| ||||||| Sbjct 114860 CATGATGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACCTACATCAAGGA 114919 Query 1456068 CCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACAC 1456106 || | | || ||||| |||||||| |||||| || || Sbjct 114920 GCCCGCCCAG-AGGACTCACCTCTTCAACGCCATTGAGAC 114958 Score = 154 bits (170), Expect = 2e-31 Identities = 197/266 (74%), Gaps = 4/266 (2%) Strand=Plus/Plus Query 1456516 CAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCC 1456575 |||| | ||||| || || |||||| |||||||| | ||||| ||| ||| | || || Sbjct 115304 CAAGGACATCATTGTTGATGCCGTCAAGATCGAGCAGGAGTTCCTCACTGAGGCCCTCCC 115363 Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635 || || ||||||||||||| | | |||||| |||||||||||||| |||||| Sbjct 115364 CTGTGCCCTTCTCGGCATGAACGCGAAC-CTCATGAAGCAGTACATTGAATTC-GTCGCC 115421 Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695 ||| | ||||||| || ||||| || ||||| |||| || | |||||||| ||| Sbjct 115422 GACAGGCTGCTCGTCGCCCTCGGAAACG-AGAAGATCTACAGGTCCGCCAACCCCTTCGA 115480 Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGA 1456754 | |||||| ||||| |||| |||||||||||||| |||||| || | ||| || Sbjct 115481 CTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 115540 Query 1456755 GTACGCCAAGGCCGGCGTCACCGCCA 1456780 ||| ||||||||||||| |||| Sbjct 115541 CTACCAGAAGGCCGGCGTCATGGCCA 115566 >seq64 Length=189920 Score = 138 bits (152), Expect = 2e-26 Identities = 300/449 (67%), Gaps = 0/449 (0%) Strand=Plus/Minus Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCC 332935 || || || || |||||| |||||||| |||||||| | | ||| |||||| || Sbjct 50036 CGGAGAATAGCGCAACGGGACTGCAGGGGCTCGATGATCTTGTTGGACTGGTTGCACGCG 49977 Query 332936 AGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCC 332995 | || |||||||| || |||| | ||||||| || |||||||||||||| || Sbjct 49976 AACGCGAACCGCGTGGTGTTGGAGTAGATTTCCATCGTTCGGCGGAGGGCCTGTTGCGCG 49917 Query 332996 GCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAGA 333055 ||| || | || |||||| ||||||||||||| || ||||||||| ||| | ||||| Sbjct 49916 CCCGAGGTCATGCTGTCGGCTTCGTCGAGGATGACGAGCTTGTGGCGACCGGGGGGCAGG 49857 Query 333056 TCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTCG 333115 || | || |||| | ||||| || ||||||||||| | ||| | ||| Sbjct 49856 GTGACTTTCTTTTGGGCGAAGCCCTTGATTCGGTTTCGCACGACGTCGATGCCTCTTTCG 49797 Query 333116 TCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCC 333175 || ||||||||||| || ||||| || | ||| | || | | || || Sbjct 49796 TCACTGGCGTTGAGTTCTAGTACGGCTTCCTTATAGGCGTCTCCGAGTAATTGCCGTGCG 49737 Query 333176 AGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGGC 333235 ||||| |||||| || || ||||| | || ||| || | | | || || |||| Sbjct 49736 AGGCAGTGGATGCTTGTCGTTTTGCCGATACCTGGCATTCCGGAGATGATGACGTGGGGC 49677 Query 333236 ATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAATG 333295 |||||||| || || | ||||||| | | | | ||||||||| | | Sbjct 49676 ATGTTGCCTTCTCGAGCGATGATCTTGAGGCGTTCTATCGTTTCTGTGTTGCCGACGACG 49617 Query 333296 TCGTCGAGCACCATTGGGCGGTACTTTTC 333324 ||||| || | || || | ||||||||| Sbjct 49616 TCGTCTAGGAAGATGGGTCTGTACTTTTC 49588 >seq25 Length=276129 Score = 96.9 bits (106), Expect = 5e-14 Identities = 178/259 (69%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || || ||||| || ||||||||||| | | ||| || |||||||| || | ||| Sbjct 147568 CCTACTCTCTTCAACGCCGGCACGCCCCAAGCCCAGTTATCTTCGTGCTTCCTCGTCGAC 147627 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| || || ||||| || || ||||| | ||| ||||| | ||||| Sbjct 147628 ATGAAGGATGACAGTATTGAGGGAATTTACGACACATTGAAGACTTGCGCAATGATCTCA 147687 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGG--TGCGCGCCGCGGGCGCCTACG 260102 || |||||| |||||||| | | || || | | |||||| | ||| | || Sbjct 147688 AAAATGGCCGGTGGCATCGGCCT--CAACATCCATCGCATTCGCGCCACAGGCTCATATA 147745 Query 260103 TGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACA 260162 | || || || || || ||||||||| || | ||||||||||| || || ||| ||| Sbjct 147746 TTGCCGGGACAAATGGAACATCCAACGGCATTATTCCCATGCTTCGTGTCTTCAACAACA 147805 Query 260163 CGGCGCGCTACGTCGACCA 260181 | || | ||||| ||||| Sbjct 147806 CCGCCAGGTACGTTGACCA 147824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177754582771094