Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq25 221 2e-52 >seq25 Length=276129 Score = 221 bits (244), Expect = 2e-52 Identities = 1213/1907 (64%), Gaps = 75/1907 (4%) Strand=Plus/Minus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || |||||||| |||| | ||||| | || || | ||||||||| || || ||||| Sbjct 149216 GTGAACTGAATAGGTGCCGCTGCGGCCTGGGTTCGCAAATAGTACATGCCAGTCTTCAGG 149157 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCT--- 68490 || || |||| || ||| ||||| || || | || | |||| |||| Sbjct 149156 CCAAGCTTCCAGCCAGTGAAGTGCATGCTCGTGATCTTCCC----CATGGAA-GGCTCTC 149102 Query 68491 --ATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTT 68548 ||||| ||||||| || || ||||||||||| || |||| ||| || ||||| | Sbjct 149101 GCATATGGATATTCAGAGACTGCGACTGATCGATGAAGGCACCTCGATCGGCAGCCATCT 149042 Query 68549 TTATAA---TACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCAT 68605 | | ||| || ||| |||||||| | ||||| | | |||||||| | Sbjct 149041 GGACCACGGTACGCTGG-GAG--ATTTCCCATACGGTCTTGTAGAGGGCCTTGATATCCT 148985 Query 68606 CTGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCT 68662 | |||| ||| | |||||||||| || ||||| |||| || || ||| || ||| Sbjct 148984 CGGGAATGCTTGGGATATTTTGAATAGAGCCACCTTCGGCGATGATGCGATTTTTCATCG 148925 Query 68663 CATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGC---GGATTAACTATTT 68719 || ||| | || | | | | ||||| || || || || | | Sbjct 148924 AGTCCGACCAAAGGCCAAGGTCAACAAGATCCC---GGAGAAGCCAGGGGTTGACGACCT 148868 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 | || || || | || || | || |||||| || || |||||||| | ||| Sbjct 148867 GGAACTCGCCCGCCAAGACGCGTCGTTGGTAAATGTTCGATGTGTATGGTTCAAAGCATT 148808 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839 | || || || |||||||||| || |||||| ||||| || |||| ||| | || | Sbjct 148807 CGTTGTTCCCGAGAATTTGAGATGTGCTTGCAGTGGGCATGGGGGCCAACAAAAGGCTGT 148748 Query 68840 TTCTAAGACCATG-TGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898 | | | ||||| || | |||| | || || ||| | ||| | ||| || || || Sbjct 148747 TACGGACGCCATGCTGCT-TGATCTGCTCCTTCAGAGCATCCCAGTTCCACAGGTCCGAG 148689 Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATAT 68958 || |||||||| | ||||| || |||||||| | | | || || | || Sbjct 148688 GGCTTGACATTCCACATGTCGTACTGGAGAATTCCTTGAGAGACGGGAGAGCCTTCGTAC 148629 Query 68959 GTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTT--GCCTCTAATGCACCGTAAT 69016 || ||| || || | || | || | || | | | || || | || ||| | Sbjct 148628 GTCGAATAGGGGCCCTGCTCCTTGGCGA--TCTCCATTGACGCTTCCAGAGCGGCGTGGT 148571 Query 69017 AAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAA 69075 | ||||| || || || | ||||||| | | || || || | ||||| || | Sbjct 148570 AGATTGTCTCAAAGATTTGAGTATTGAGCTGCCTG-GCCTCGGGGGATTCGAAGGGC--A 148514 Query 69076 TGTAAAAG--AATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTC 69133 || | | || || ||||| |||||||| || || || | ||| || || | || | Sbjct 148513 TGCGCAGGGCAAGGAAGGCATCCGCCAATCCTTGCACGCCCACACCAATGGGCCGGTGGC 148454 Query 69134 TCTTATTTGAACTTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTA 69192 | |||| | || | | | || | | || || || || | ||| || || ||||| Sbjct 148453 GCATATT-GCTGTTGCGGGCCTCCTGTACCGGGTAGTAGTTGACATCAATGATCTTATTG 148395 Query 69193 AGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-TCGTCCATC 69251 |||||||| || || || || ||| || | ||||| ||| || | ||| || | Sbjct 148394 AGATTTCGAACGACGACCTTGGTCACTTCGTGGAGTTTCTCAAAGTCGTACTCGCCCTTG 148335 Query 69252 TA-TA----ACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTA 69306 | || || ||| || || | ||||| | || ||||| || || |||| Sbjct 148334 TTGTAGTCGACGAACGAGGGCAAGGCAAGCGATGCCAAGTTGCAAACCGCCACTTCATCC 148275 Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTA---CTACATTTGATAGTCCCCAGA 69363 | | | || | || ||||| || || ||||| |||| |||||| || || Sbjct 148274 GGAGCCGAGTACTCGATGATCTCGGTGCAGAGATTGGAGCTACG---GATAGTGCCAAGG 148218 Query 69364 TTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTT 69423 || | || || ||||| ||| ||| |||||||||||| || || ||| | || ||| Sbjct 148217 TTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAAAGGATTTCCTGTT 148158 Query 69424 TCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT---AGCATTTATTACGGTCTTG 69480 || |||||| || | || | | ||| || | | ||| || | |||||| Sbjct 148157 TCGGTCTGAGCCTCCAAGATGGCGTACCA---GAGCTTTTGAGCCTTGAGA---GTCTTG 148104 Query 69481 TAAC-GCTTC--TCTTTTTCATATTGTGTATATA--GCCGTTCGAATTCATCTCCCCAAA 69535 || || | || || || || | | ||| | ||| ||||| || || || | Sbjct 148103 CGACCGCGGCCTTCCTTCTCGTACTTTTCATACAAAGCC--TCGAACTCCTCACCATAGC 148046 Query 69536 CATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAA 69595 ||| | | || || ||||| || || ||||||| | ||| | | | | | || Sbjct 148045 AATCGGCAAGGCCGGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCAA 147986 Query 69596 CTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTT 69655 |||| ||||| || |||||||||||||| || || | |||||||| | | || | | | Sbjct 147985 CTCGCTTCATGAAAAGATCGGGAATCCAGAGTGCGAGGAAGAGATCACGAGCTCGAATCT 147926 Query 69656 CTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTT 69715 |||| || || || || ||| || | ||||| | | ||| | |||||||| | Sbjct 147925 CTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCGAATACATCCGCGTGCCATGGCT 147866 Query 69716 CTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAG 69775 | || || || || | | ||||||| || ||||| || || || || | ||| ||||| | Sbjct 147865 CAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTACCGCCTTGGTCAACGTACCTGGCGG 147806 Query 69776 TGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAA 69835 |||| || |||| | ||||| |||||||| || || ||| | |||||||| || | || Sbjct 147805 TGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGATGTTCCATTTGTCCCGGCAA 147746 Query 69836 TATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAG 69895 |||| ||| | |||||||| | || || || || || || |||||||| | Sbjct 147745 TATATGAGCCTGTGGCGCGAATGCGATGGATGTTGAGGCCGATGCCACCGGCCATTTTTG 147686 Query 69896 AGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGT 69955 |||| | || ||| ||||||||||| || || ||||| || || ||||| |||||| Sbjct 147685 AGATCATTGCGCAAGTCTTCAATGTGTCGTAAATTCCCTCAATACTGTCATCCTTCATGT 147626 Query 69956 TAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAG 70015 | || || || ||| | || || || || || || || | ||||| | Sbjct 147625 CGACGAGGAAGCACGAAGATAACTGGGCTTGGGGCGTGCCGGCGTTGAAGAGAGTAGGTG 147566 Query 70016 ATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATAT 70075 | || |||||||| |||| || | |||||||| || ||||| | || | | Sbjct 147565 AAGCATGAGTGAAGAATTTGGACGACATTAGATTGTACGTCTCAATCACCCGCTCAACGT 147506 Query 70076 C--CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGT 70133 | | | | ||| || | ||||||||||| | ||| ||||||||||| || || | Sbjct 147505 CATCGCCCCA--AATACCGACAGCGACACGCATAATCATGTGCTGAGGTCGCTCGACAAT 147448 Query 70134 TTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193 || || | ||||| |||||||| ||| || || || || || || || | ||| Sbjct 147447 CTTCCCATCGAGTTTCAGGAGGTATGACCGTTCGAGGGTCTTGAAGCCGAAGTATTGGTA 147388 Query 70194 --TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTT 70238 ||||| || || || || | ||| | |||| || | ||||| Sbjct 147387 ATTGAAA--TCCCTGTCATAGACAATGGCTGAATCAAGCTCCTCCTT 147343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686903759806680