Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq25 96.9 3e-15 seq38 89.7 4e-13 seq5 86.0 5e-12 >seq25 Length=276129 Score = 96.9 bits (106), Expect = 3e-15 Identities = 283/433 (65%), Gaps = 5/433 (1%) Strand=Plus/Minus Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661 ||| |||||| |||| ||||| || | ||| ||||||||| ||||||||||||||| || Sbjct 148032 GGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCAACTCGCTTCATGAA 147973 Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721 | ||| || | ||| | ||| || ||||| | |||| ||||||| || || | Sbjct 147972 AAGATCGGGAATCCAGAGTGCGAGGAAGAGATCACGAGCTCGAATCTCTTCCTTA-CCGT 147914 Query 131722 AAtttttttCAA-ATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTG 131780 || || || | || || || || | ||||| ||||| || || | || | | Sbjct 147913 GGTTCTTGCGAAGGTCCAAGAACTCGAATACATCCGCGTGCCATGGCTCAAGGTAGATGG 147854 Query 131781 CCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATA 131837 | | || || |||| ||||||||||| | ||| | | | |||||||| | | Sbjct 147853 CAAAGGCTCCCGGGCGCTTATTACCGCCTTGGTCAACGTACCTGGCGGTGTTGTTGAAGA 147794 Query 131838 CGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCAT 131897 | || | |||||| | ||||||| ||||||| || | ||| || ||| Sbjct 147793 CACGAAGCATGGGAATAATGCCGTTGGATGTTCCATTTGTCCCGGCAATATATGAGCCTG 147734 Query 131898 TGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGC 131957 |||| | || || | |||||| || || || ||| | ||| ||||| | ||||| Sbjct 147733 TGGCGCGAATGCGATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGC 147674 Query 131958 ATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGC 132017 | | | | |||| || || || || | ||||| | |||||||| | |||| Sbjct 147673 AAGTCTTCAATGTGTCGTAAATTCCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGC 147614 Query 132018 AAGAGGACAACTG 132030 | || || ||||| Sbjct 147613 ACGAAGATAACTG 147601 >seq38 Length=234780 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| | | |||| |||| |||||||| || ||| Sbjct 18486 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 18545 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || ||||||||||| || || || | ||||| || || ||||||| || Sbjct 18546 GCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 18605 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | || || || || || || || | |||||||| || || Sbjct 18606 ACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTC 18665 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||||||||| Sbjct 18666 TTGACGAAGATTTGCAT 18682 >seq5 Length=463292 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTG 27103 ||| | |||||| || || || |||||||| || | |||| |||| || ||||| Sbjct 253173 ATGGAGCGTAGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTG 253232 Query 27104 TTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163 || |||||| ||||||||||||| ||||| || || | ||||| || || ||||| Sbjct 253233 CTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGGATTCCCTCCTTGTCCTGAATCTT 253292 Query 27164 GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223 |||| | || | || || | | || ||||| || || || | ||||| || Sbjct 253293 CGACTTCACATTGTCGATGGTATCGGAAGACTCGACTTCGAGCGTAATGGTCTTGCCGGT 253352 Query 27224 CAGAGTTTTCACAAAGATTTGCATA 27248 || || || |||||||| |||||| Sbjct 253353 AAGGGTCTTGACAAAGATCTGCATA 253377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931359992744