Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq25 248 1e-60 seq121 93.3 5e-14 seq123 87.8 2e-12 >seq25 Length=276129 Score = 248 bits (274), Expect = 1e-60 Identities = 905/1397 (65%), Gaps = 35/1397 (3%) Strand=Plus/Minus Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765 |||| ||||| | ||||||||||||||||||||| || || || | ||||| | ||| Sbjct 148840 GGTAAATGTTCGATGTGTATGGTTCAAAGCATTCGTTGTTCCCGAGAATTTGAGATGTGC 148781 Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825 || || ||||| || |||| |||||| |||||||| | || | || |||||| | | Sbjct 148780 TTGCAGTGGGCATGGGGGCCAACAAAAGGCTGTTACGGACGCCATGCTGCTTGATCTGCT 148721 Query 110826 CCTTGAGAACATCCCAGT--CGTAGTT--GAGCTTGGTTTCACCTTCCCACATGTCAAAC 110881 |||| ||| ||||||||| | || | ||| || || || || ||||||||| || Sbjct 148720 CCTTCAGAGCATCCCAGTTCCACAGGTCCGAG---GGCTTGACATT-CCACATGTCGTAC 148665 Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941 || || | ||||| || ||||||| || || | || ||||| || || | | Sbjct 148664 TGGAGAATTCCTTGAGAGACGGGAGAGCCTTCGTACGTCGAATAGGGGCCCTGCTCCTTG 148605 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | || ||| ||||| | ||||| || || || |||||||| ||| ||| Sbjct 148604 GCGATCTCCATTGACGCTTCCAGAGCGGCGTGGTAGATTGTCTCAAAGATTTGAGTATTG 148545 Query 111002 ATCTCCTTGGCTTC-----ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 111056 | || | |||| || || ||| ||||| || ||| || || |||||| Sbjct 148544 AGCTGCCTGGCCTCGGGGGATTCGAAGGGCATGCGCAG-GGC----AAGGAAGGCATCCG 148490 Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116 | | ||||| || |||| |||||| || | ||| |||||||| || || || || Sbjct 148489 CCAATCCTTGCACGCCCACACCAATGGGCCGGTGGCGCATATTGCTGTTGCGGGCCTCCT 148430 Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 || || || | || ||||||| || |||||| || | ||| || | Sbjct 148429 GTACCGGGTAGTAGTTGACATCAATGATCTTATTGAGATTTCGAACGACGACCTTGGTCA 148370 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236 ||| || ||||| ||| | || | || | | | | ||| || || | || Sbjct 148369 CTTCGTGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTAGTCGACGAACGAGGGCAAGG 148310 Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296 | | |||||||| |||||||| ||| |||||| | | | |||||| | || || | Sbjct 148309 CAAGCGATGCCAAGTTGCAAACCGCCACTTCATCCGGAGCCGAGTACTCGATGATCTCGG 148250 Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356 | || | ||||| || || || || | ||||||||||| ||||| |||||| Sbjct 148249 TGCAGAGATTGGAGCTACGGATAGTGCCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGT 148190 Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416 |||||||| |||||| | || | || || || ||||| | | | || || | || Sbjct 148189 GGTCCTTGTAAAGCATGAAAGGATTTCCTGTTTCGGTCTGAGCCTCCAAGATGGCGTACC 148130 Query 111417 A-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 111475 | | | | | | || | | | | | | || || ||| |||||||||| || Sbjct 148129 AGAGCTTTTGAGCCTTG-AGAGTCTTGCGACCGCGGCCTTCCTTCTCGTACTTTTCATAC 148071 Query 111476 AGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGA 111533 | || || ||||||||| ||| || |||| || || || || || || || || | Sbjct 148070 AAAGCCTCGAACTCCTCA-CCATAGCAATCGGCAAGGCC-GGGGCATTCGTTGGGGCACA 148013 Query 111534 AAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 111593 || | ||| | || | ||||| |||||||||||||| || |||||||| || | Sbjct 148012 TCAGGGTCCAGTCGCCGTTCTTTTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGTG 147953 Query 111594 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 111653 |||||||| | | ||| |||||| | ||| ||||| || | || | || Sbjct 147952 CGAGGAAGAGATCACGAGCTCGAATCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGA 147893 Query 111654 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---AC 111710 |||| | | ||||||||||||||||||||| |||| || | | |||| || | Sbjct 147892 ACTCGAATACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTAT 147833 Query 111711 GCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 111770 || |||| | || || | || ||| ||| || || |||||||| |||||||| | Sbjct 147832 TACCGCCTTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGC 147773 Query 111771 CATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGT 111830 | | ||| ||||||||||| |||| || |||| | | |||||||| Sbjct 147772 CGTTGGATGTTCCATTTGTCCCGGCAATATATGAGCCTGTGGCGCGAATGCGATGGATGT 147713 Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATA 111888 | || || || || ||| |||||||| ||||||| | | | | | || | || Sbjct 147712 TGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCA-AGT-CTTCAATGTGTCGTA 147655 Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948 || || | || ||| ||||| || ||| |||||||| || | ||| | | Sbjct 147654 AATTCCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAAGATAACTGGGCTTG 147595 Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATC 112006 || || || || |||||||| || |||| || ||| ||| | | |||| ||||| Sbjct 147594 GGGCGTGCCGGCGTTGAAGAGAGTAGGTGAAGCATGAGTGA--AGAATTTGGACGACATT 147537 Query 112007 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGC 112066 | ||| ||||| | || |||| ||| || || || |||| ||||| ||| Sbjct 147536 AGATTGTACGTCTCAATCACCCGCTCAACGTCATCGCCCCAAATACCGACAGCGACACGC 147477 Query 112067 ATGAACATGTACTGTGG 112083 || | ||||| ||| || Sbjct 147476 ATAATCATGTGCTGAGG 147460 >seq121 Length=116706 Score = 93.3 bits (102), Expect = 5e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || ||||| || || ||||| |||||| ||||| |||||||| || Sbjct 115244 GTGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTAAGACCGGGCATGAGGCC 115185 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| |||| | | || | ||| ||||||||||||||| || Sbjct 115184 ACGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGC 115125 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || || |||| || || | ||||||| Sbjct 115124 AGCGAAGGCAACGAGACGCTGAGCGAAGG 115096 >seq123 Length=115524 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/236 (69%), Gaps = 10/236 (4%) Strand=Plus/Plus Query 11707 ACCCACACCAACAAACATCTCCACAAAGTTTG--CGGCAGAGCACTGGATGAATGGGACA 11764 ||| ||||| |||||||||||||| || | | | || || | ||| | ||| ||||| Sbjct 7154 ACCGACACCGACAAACATCTCCACGAATTCCGATCCGCTGA-CGCTGAA-GAAGGGGACC 7211 Query 11765 TTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCG 11824 | | || || || |||| ||| || |||||||| || ||||| || ||| || Sbjct 7212 TCGCACTCGCCGGCCGTGGCCTTGGCAAGAAGGGTCTTACCAGTACCGGGGGGACCGGCC 7271 Query 11825 AGAAGGGCGCCTCGGGGGATCTTGGCACC---ACTTCCAAAATATCTCTCGGGTTGCTTG 11881 |||| ||| || ||||| ||||||||||| |||| || | ||||||| |||| Sbjct 7272 AGAATGGCACCGCGGGGAATCTTGGCACCGAGCCTTCGGAACT---TCTCGGGAGTCTTG 7328 Query 11882 AGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATCCCCTCAACATC 11937 || || |||| ||| || ||| | |||||| |||| || ||| | ||||| Sbjct 7329 AGGAAGCTGACAAACTCCATAATTTCCACCTTGGCCTCGTCCATGCCCGCGACATC 7384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027391815200