Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq5 178 4e-39 seq282 145 2e-29 seq35 100 9e-16 seq25 84.2 7e-11 >seq5 Length=463292 Score = 178 bits (196), Expect = 4e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || ||||| || ||||| || ||||| Sbjct 253374 CATACCACCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 253433 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| ||||| || ||||||||||| |||||||| || || || Sbjct 253434 AGAAAGGGTGCGGCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCGGG 253493 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || ||||||||||| || | || || || || || | || |||| ||| Sbjct 253494 AGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTC 253553 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || |||| ||||| ||||| || || || || ||||||||||| Sbjct 253554 AACTTCGAGGGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 253604 Score = 136 bits (150), Expect = 1e-26 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | |||||||| ||||| || || || || |||||||| ||||| Sbjct 253912 CATACCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATC 253971 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | ||||| || || ||||| || |||||||| || || || || |||||||| || Sbjct 253972 AGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGATCGGG 254031 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || ||||| || || | || ||||| || || | |||||| | || Sbjct 254032 GGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTC 254091 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTT 140721 || || || || | ||||| || || | | ||| Sbjct 254092 GACCTCGAGGGTGATGGTCTTGCCAGTGACTATTT 254126 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| || || ||||| || || ||||| || || Sbjct 253602 CATACCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTC 253661 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || || || || || | ||||| || ||||| Sbjct 253662 GGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGG 253721 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | || ||||| || || | || || | || Sbjct 253722 AGGAATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTC 253781 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || | ||||| ||||| || || || || Sbjct 253782 GACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 253820 >seq282 Length=47922 Score = 145 bits (160), Expect = 2e-29 Identities = 327/489 (67%), Gaps = 2/489 (0%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || || || || || ||||| || || ||| | |||||| || || || || ||| Sbjct 2660 GCCGTCATCACGGTCCCCGCCTACTTCAACGATTCTCAGCGTCAGGCTACCAAGGACGCT 2601 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || |||||||| || || || || Sbjct 2600 GGTCTCATTGCCGGTCTCAACGTCCTCCGTATCATCAACGAACCCACCGCCGCTGCCATC 2541 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || || || || | | || || || | || ||||| ||| | ||| Sbjct 2540 GCCTACGGCCTCGACAAGAAGCACGAGGGTGAGCGCAACGTCCTCATTTTCGATCTTGGT 2481 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||||||||| ||||| || || || || |||| || || || ||||| || || || Sbjct 2480 GGTGGTACTTTCGATGTCTCCCTCCTCACCATTGAGGATGGTATCTTTGAGGTCAAGGCT 2421 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || |||||||| || || |||||||| |||||| | || || || || || ||| || Sbjct 2420 ACCGCTGGTGACACTCACCTTGGTGGTGAAGATATGGACAACCGCCTGGTGCAGCACTTC 2361 Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 | || || || ||||| ||||| || | ||| || || | | || | || Sbjct 2360 ATCAACGAGTTCAAGCG-CAAGCACAAGAAGGATCTTTCTTCCAACGCCCGTGCGCTCCG 2302 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028 ||||| | || || ||||| ||||| ||||| || | || || || |||| ||||| Sbjct 2301 CCGCCTCCGCACCGCTTGTGAGCGTGCCAAGCGAACCCTCTCTTCGTCTGCCCAGACCTC 2242 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 || || || || ||||| || || | || |||| | || || || ||||| || Sbjct 2241 CATCGAGATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCCCG 2182 Query 350089 GTTTGAAGA 350097 || || || Sbjct 2181 TTTCGAGGA 2173 >seq35 Length=244500 Score = 100 bits (110), Expect = 9e-16 Identities = 106/139 (76%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 ||||| ||||| |||||| ||| || || | ||||||||||| ||||| ||||| Sbjct 18932 CGTGGAACACCCAATGTAACGTTC---TTGGACGATACACCAGCAAAATGGAATGTATTG 18988 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | |||||| | ||||||||||| ||||| || || | ||| ||||||||||| Sbjct 18989 AGCGTCATTTGAGTGGCAGGCTCACCAATGGACTGGGCCGCCAGAACACCAACCATTTCG 19048 Query 377578 CCAGGATTGACAATAGCCT 377596 ||||| || || | |||| Sbjct 19049 CCAGGGTTCACGAATGCCT 19067 >seq25 Length=276129 Score = 84.2 bits (92), Expect = 7e-11 Identities = 198/299 (66%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 206449 TGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGAA 206508 ||||||| || | || || || || || || | ||||| |||||||| || || || Sbjct 147824 TGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGAT 147765 Query 206509 GTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATATGTAATCCA 206568 ||||||||||| || ||||| ||| || | | ||| ||| || | | || Sbjct 147764 GTTCCATTTGTCCCGGCAATATATGAGCCTGTGGCGCGAATGCGATGGATGTTGAGGCCG 147705 Query 206569 ATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCATCA 206628 || || || ||| |||||| || | || || || ||||| | |||||||| ||| Sbjct 147704 ATGCCACCGGCCATTTTTGAGATCATTGCGCAAGTCTTCAATGTGTCGTAAATTCCCTCA 147645 Query 206629 ACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGTTCCA 206688 | ||| ||| | ||| | | | || || ||| ||| || | | | ||||| || Sbjct 147644 ATACTGTCATCCTTCATGTCGACGAGGAAGCACGAAGATAACTGGGCTTGGGGCGTGCCG 147585 Query 206689 GCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAATTATAAGT 206747 || || || | |||||| | |||||| || || |||| ||||||| ||| || || Sbjct 147584 GCGTTGAAGAGAGTAGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGATTGTACGT 147526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515243003866361