Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq25 179 4e-40 seq111 95.1 1e-14 >seq25 Length=276129 Score = 179 bits (198), Expect = 4e-40 Identities = 466/706 (66%), Gaps = 6/706 (1%) Strand=Plus/Plus Query 53242 TGAGACGTACGACTTAATGA-GCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCA 53300 |||||||||| | ||||| | | ||| | ||| || || || | || || || |||| Sbjct 147522 TGAGACGTACAATCTAATGTCGTCCAAATT-CTTCACTCATGCTTCACCTACTCTCTTCA 147580 Query 53301 ACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACT 53360 |||| || ||| || | ||| | || |||||||| || | |||||||||||| Sbjct 147581 ACGCCGGCACGCCCCAAGCCCAGTTATCTTCGTGCTTCCTCGTCGACATGAAGGATGACA 147640 Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420 || || || || ||||| || | ||| || || ||||| || | | |||| Sbjct 147641 GTATTGAGGGAATTTACGACACATTGAAGACTTGCGCAATGATCTCAAAAATGGCCGGTG 147700 Query 53421 GTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAA 53478 | ||||| || || | ||| | | || || | ||| || || ||||| || Sbjct 147701 GCATCGGCCTCAACATCCATCGCA--TTCGCGCCACAGGCTCATATATTGCCGGGACAAA 147758 Query 53479 CGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGT 53538 || || | || || | || ||||| || |||||||||||||| ||| ||||||| Sbjct 147759 TGGAACATCCAACGGCATTATTCCCATGCTTCGTGTCTTCAACAACACCGCCAGGTACGT 147818 Query 53539 CAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGC 53598 |||| || ||| |||||| ||| | || ||||||||||| ||||| |||||||| Sbjct 147819 TGACCAAGGCGGTAATAAGCGCCCGGGAGCCTTTGCCATCTACCTTGAGCCATGGCACGC 147878 Query 53599 CGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCG 53658 || | | ||||| | || || || ||| || ||| | |||||||| || || Sbjct 147879 GGATGTATTCGAGTTCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGATTCGAGCTCG 147938 Query 53659 TGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGA 53718 ||| || || || || |||||||| || || |||||| | || || ||| ||| Sbjct 147939 TGATCTCTTCCTCGCACTCTGGATTCCCGATCTTTTCATGAAGCGAGTTGAAAAGAACGG 147998 Query 53719 GGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGA 53778 || ||| |||||||||||| ||||| ||||||||||| | | ||| |||||||| Sbjct 147999 CGACTGGACCCTGATGTGCCCCAACGAATGCCCCGGCCTTGCCGATTGCTATGGTGAGGA 148058 Query 53779 GTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGC 53838 ||| | | ||||| | ||||| | |||||| |||| ||||||| Sbjct 148059 GTTCGAGGCTTTGTATGAAAAGTACGAGAAGGAAGGCCGCGGTCGCAAGACTCTCAAGGC 148118 Query 53839 GCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTG 53898 | || | ||| | || ||| | || ||| || || |||| || | |||| Sbjct 148119 TCAAAAGCTCTGGTACGCCATCTTGGAGGCTCAGACCGAAACAGGAAATCCTTTCATGCT 148178 Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 |||||||| |||| ||||||||||| |||||| | ||| Sbjct 148179 TTACAAGGACCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGC 148224 >seq111 Length=123961 Score = 95.1 bits (104), Expect = 1e-14 Identities = 278/422 (66%), Gaps = 6/422 (1%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || ||||| || || || |||||||| |||| ||| ||||| | |||||||| | Sbjct 24070 CCAGTGCCGATACCATCAGCGCCGTTGACAAGAACCATTGGCACGACGGGGGCGTAGACT 24129 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCA-GC-CG 151993 | ||||| | | | ||||| || | ||| | | || | |||| || || Sbjct 24130 TTGGGCTCAATTCGCTTTCCGTCCTCGAATTGGTAGTCGAGGTTGGGCTCGTCAAGCGCG 24189 Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCG 152053 || ||| | | || | | ||| | ||||||| |||||||||| | |||||| | Sbjct 24190 GA--GAAGACCTTGCGGGCAAAAGGCGAGAGACGCGTGTAGATGTATCGAGCGCTGGCGG 24247 Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113 |||| ||||||||||| || | || || | ||| ||||||||| ||||| || Sbjct 24248 CATCTGAGCCACCTGCCAAACGAGAACCGAAATTTCCGCTGGGCTCGAGACAGTTGACGT 24307 Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCAC 152173 |||| | |||||| ||||| || || | | || || || || ||| | |||| Sbjct 24308 TGTTCGAGCCCACAAAATTTTGGGCGAGACCGACGATGGTCTGTTGAAGAGATACGTCAC 24367 Query 152174 CGTGGTGATACGCCGTC-TGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232 ||||||| |||| ||| ||| | |||| | ||||| | | || ||| ||| Sbjct 24368 CGTGGTGGTACGAGGTCAAGCT-GGAGATGAAACCCGCGAGATCGTTGACTTTCTGATCC 24426 Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCG 152292 | | || ||||| |||| ||||||| ||||| ||||| || ||||| ||| Sbjct 24427 TTGACAACATTTCGCTTGAAACAGCCGTAAATGACCTTTCGCTGACCCGGCTTCAAGCCG 24486 Query 152293 TC 152294 || Sbjct 24487 TC 24488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547211984802600