Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq38 145 2e-29 seq5 141 2e-28 seq452 125 2e-23 >seq38 Length=234780 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| |||||||| ||||| || || |||| ||||| || | | || Sbjct 18461 ACGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGT 18520 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| || || ||||||||||| || || || Sbjct 18521 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCC 18580 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||| ||||| |||| || || || | Sbjct 18581 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCAAG 18640 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||||||||| | || || | ||| | |||||| || Sbjct 18641 GGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 18685 >seq5 Length=463292 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || ||||| ||||| || || |||| |||||| |||| | || | ||||| Sbjct 253621 AGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCC 253680 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || | |||||||||||| || |||||||| |||||||| Sbjct 253681 TCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCC 253740 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || | || || || | ||||| ||| Sbjct 253741 TGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 253800 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 253801 TTGCCGGT 253808 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || ||||| || || || | |||||||| | | || | |||||| Sbjct 253393 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCT 253452 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||| |||||||| |||||||||||||| || || || ||||| || Sbjct 253453 TCCAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCGGGAGGGATGCCCTCCTTATCC 253512 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| || | ||| || || | || |||||| Sbjct 253513 TGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTC 253572 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | ||||| Sbjct 253573 TTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 253604 >seq452 Length=8082 Score = 125 bits (138), Expect = 2e-23 Identities = 202/285 (71%), Gaps = 8/285 (3%) Strand=Plus/Minus Query 7436 TGGAAACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTA 7495 |||||| |||||||||||||||| ||||| || | ||||||| |||||| Sbjct 5205 TGGAAAT-TTATATTTAATATTTGCATTATTTTCAGGGTTATTAGGTACAGCTTTTTCTG 5147 Query 7496 TGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCA 7553 | | ||||| ||||||||| || || ||| ||| | || | || |||| || Sbjct 5146 TTTTAATAAGATTAGAATTAAGTGGACCTGGTGTACAATACATATCAGA--TAAT---CA 5092 Query 7554 ACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCC 7613 | | || || ||| ||||| || ||||| | | ||||| |||||| | |||||||| Sbjct 5091 ATTATATAATAGTATAATTACAGCTCATGCTATATTAATGATATTCTTTATGGTTATGCC 5032 Query 7614 GGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATAT 7673 | | ||||| || || ||||||| | | ||||||||||| || | ||||||||| Sbjct 5031 TGCATTAATAGGTGGATTTGGAAATTTCCTAATGCCTTTAATGATAGGAGGTCCTGATAT 4972 Query 7674 GGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718 ||| || || || | || ||||||||||| |||||| |||| || Sbjct 4971 GGCGTTCCCTAGATTAAATAATATAAGTTTCTGATTATTACCTCC 4927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192522231047378