Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq5 178 3e-39 seq38 159 7e-34 seq287 125 1e-23 seq121 93.3 9e-14 seq80 91.5 3e-13 >seq5 Length=463292 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||| || || || |||||||| |||| Sbjct 253377 ACCACCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGA 253436 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||||||||| || ||||| || || |||||||| | |||||||||||| || Sbjct 253437 AAGGGTGCGGCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCGGGAGG 253496 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || || ||||| | || ||| | ||||| |||||||| | ||| || Sbjct 253497 GATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAAC 253556 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| || |||||||| || || | |||||| ||||| |||||||| Sbjct 253557 TTCGAGGGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 253604 Score = 178 bits (196), Expect = 3e-39 Identities = 170/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||||||| | |||| || || ||||| |||||||| | Sbjct 253605 ACCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGA 253664 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| || ||||| |||||||||||| || Sbjct 253665 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGG 253724 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| | || || | ||||| ||||| || | ||||| Sbjct 253725 AATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGAC 253784 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||| ||||| ||||| || || | ||||| |||| Sbjct 253785 CTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGA 253822 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || ||||| | ||| || || ||||| ||||| |||| | Sbjct 253150 CCACCACGAAGGCGGAGGACGAGATGGAGCGTAGACTCCTTCTGGATATTGTAATCAGAA 253209 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| || || | ||| || || || || Sbjct 253210 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGG 253269 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || || | ||||| || || |||| |||||| Sbjct 253270 ATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCGACT 253329 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || || | ||||| || || |||||||| Sbjct 253330 TCGAGCGTAATGGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 253376 Score = 120 bits (132), Expect = 6e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||| ||| || || || ||||| |||| Sbjct 253915 ACCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGA 253974 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || || || || |||| || || || || || Sbjct 253975 AAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGATCGGGGGG 254034 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || || | ||||| || || || | ||||| Sbjct 254035 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCGAC 254094 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 254095 CTCGAGGGTGATGGTCTTGCCAGT 254118 >seq38 Length=234780 Score = 159 bits (176), Expect = 7e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | ||| || || |||||||||||||| | Sbjct 18455 ACCGCCACGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 18514 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||||| ||| |||||||| || Sbjct 18515 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGG 18574 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| |||||||| | ||||| Sbjct 18575 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 18634 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||| ||||| | ||||| ||||| || ||||| || Sbjct 18635 CTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 18685 >seq287 Length=44202 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || || || ||||| |||| ||| |||||||||||||| || || || ||||| || || Sbjct 23321 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 23380 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| ||||| || || || ||||||||||| || ||||| | || || | ||| Sbjct 23381 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 23440 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| || || ||||| ||||||||||| | ||||| || || Sbjct 23441 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAA 23499 >seq121 Length=116706 Score = 93.3 bits (102), Expect = 9e-14 Identities = 131/183 (72%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 ||| |||||||||| || | |||||| ||| || || |||||||| || || | | Sbjct 115371 CTTCTCGGCATGAACGCGAACCTCATGAAGCAGTACATTGAATTCGTCGCCGACAGGCTG 115430 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || || || ||||||| | || | ||| |||||||||| || |||||| Sbjct 115431 CTCGTCGCCCTCGGAAACGAGAAGATCTACAGGTCCGCCAACCCCTTCGACTTCATGGAG 115490 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAG 230401 ||| || ||| || || || ||||||||||| |||||||| | || || || ||| Sbjct 115491 AACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAG 115550 Query 230402 GCC 230404 ||| Sbjct 115551 GCC 115553 >seq80 Length=157687 Score = 91.5 bits (100), Expect = 3e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 ||||| || || | ||| |||| || || | ||| || || |||||||| | ||| Sbjct 106274 GGGAAGCCCTCGACCTGCTCGTTGTTGATGGCACGCATGAGAGTAGACTTGCCGGAACCG 106215 Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148 ||||| |||||||||||||| || | || ||| || | || ||| | ||| ||| Sbjct 106214 TTGGGACCGCAAAGACCATAGCGCTGGCCACGCTTGAGGCGGAGACCGGTCTGGTTGAGA 106155 Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 |||||||| |||| || || ||||||||| || | || ||||||||||| Sbjct 106154 AGAATCTTGGCACCGTAGGCGAGAGAGAACGTGCAGTTGCAGAGGTCCTCGCC 106102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046731327539898