Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq38 134 1e-26 seq5 120 2e-22 seq287 93.3 3e-14 >seq38 Length=234780 Score = 134 bits (148), Expect = 1e-26 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 18474 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCG 18533 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| |||||| || || | || | || ||||| ||| Sbjct 18534 AGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 18593 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||| | ||| || ||||| | || || |||| Sbjct 18594 ATCTTGGACTTGACATTGT--CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCT 18651 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||| |||||||| ||||||||||||||| Sbjct 18652 TGCCCGTTAGGGTCTTGACGAAGATTTGCATG 18683 >seq5 Length=463292 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || ||||| |||||| ||||| |||||||| | || ||| |||| || Sbjct 253168 ACGAGATGGAGCGTAGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGGCCGTCCTCA 253227 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| || || | |||||||||||| | || | || ||||| ||| Sbjct 253228 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGGATTCCCTCCTTGTCCTGA 253287 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | ||||| |||| || || || || | |||||| ||||| Sbjct 253288 ATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCGACTTCGAGCGTAATGGTCTTG 253347 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| || ||||| ||||| Sbjct 253348 CCGGTAAGGGTCTTGACAAAGATCTGCAT 253376 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| |||||| || ||||||||||| | || ||| | || ||| Sbjct 253396 ACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCC 253455 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || |||||||| | ||| || || || | ||| | || ||||| ||| Sbjct 253456 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCGGGAGGGATGCCCTCCTTATCCTGA 253515 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | ||||| || || | ||||||||||| Sbjct 253516 ATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTG 253575 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||||||||| || ||||| Sbjct 253576 CCGGTAAGAGTCTTCACGAAAATCTGCAT 253604 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/189 (70%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| ||||| || || |||||||| | || || |||| || Sbjct 253934 ACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCA 253993 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || |||| ||||||||||| | || | || ||||| ||| Sbjct 253994 AGCTGCTTTCCAGCGAAAATCAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 254053 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| || | ||| || ||||| | || || |||| Sbjct 254054 ATCTTCGACTTGACATTGT--CGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCT 254111 Query 44307 TTCCCGTGA 44315 | || |||| Sbjct 254112 TGCCAGTGA 254120 >seq287 Length=44202 Score = 93.3 bits (102), Expect = 3e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| || || |||||||| | || ||| | || || |||||||| ||||| || | Sbjct 23319 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 23378 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 | | |||||| ||||| | ||| | || ||||| ||| ||||| ||||| | Sbjct 23379 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 23438 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || ||||| | ||| || ||||| | || || ||||| |||||||||||||| || | Sbjct 23439 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAA 23498 Query 44328 A 44328 | Sbjct 23499 A 23499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987824606179